Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL356010.1-201ENST00000456364 102 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RPL21P11-201ENST00000461458 483 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC017037.1-201ENST00000508460 471 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 RNU6-314P-201ENST00000516574 104 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC012507.3-201ENST00000603556 477 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AP001330.5-201ENST00000607176 411 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC069200.1-201ENST00000609511 323 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 XIST_intron.1-201ENST00000619444 68 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 SEPT14P19-203ENST00000633205 211 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 AC103710.2-202ENST00000641454 2853 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 FAM35DP-201ENST00000323387 2712 ntBASIC3.63□□□□□ -1.83
LRFN1Q9P244 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN1Q9P244 API5P2-201ENST00000397055 1498 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 SNORA63.1-201ENST00000362493 131 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 RNU6-525P-201ENST00000363685 104 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 RNU6-512P-201ENST00000364438 103 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 Y_RNA.534-201ENST00000384599 112 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 SNORA57.3-201ENST00000411095 141 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC080125.1-201ENST00000414888 684 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC092809.3-201ENST00000415453 231 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL353193.1-201ENST00000421444 268 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN1Q9P244 HMGB3P11-201ENST00000440127 604 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 MTND4P25-201ENST00000441039 533 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC093392.2-201ENST00000450682 337 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 RNU7-182P-201ENST00000459009 62 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC098591.2-201ENST00000510152 315 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 TRMT10BP1-201ENST00000519377 943 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 ZNF519P2-201ENST00000557032 169 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 MIR4775-201ENST00000581168 75 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC130324.3-201ENST00000614165 542 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL359547.2-201ENST00000615810 418 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL391261.4-201ENST00000616012 481 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC233309.1-201ENST00000619522 751 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 FP236240.3-201ENST00000623061 327 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC012442.3-202ENST00000636742 206 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN1Q9P244 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN1Q9P244 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN1Q9P244 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
LRFN1Q9P244 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
LRFN1Q9P244 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC007256.1-201ENST00000392253 2765 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 RNA5SP124-201ENST00000362739 110 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 RNU6-270P-201ENST00000364131 105 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 RNU6-140P-201ENST00000384566 108 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 MIR449B-201ENST00000384995 97 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 MIR181A1-201ENST00000385026 110 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 CALM2P3-201ENST00000400429 449 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 SNORA3C-201ENST00000408792 125 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 RNU2-9P-201ENST00000410194 145 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC017083.1-201ENST00000428093 483 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC019235.1-201ENST00000503847 207 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.61□□□□□ -1.83
LRFN1Q9P244 PCBP2P3-201ENST00000509726 843 ntBASIC3.61□□□□□ -1.83
LRFN1Q9P244 Y_RNA.689-201ENST00000516589 107 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms