Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC132479.1-201ENST00000449160 144 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPL7P5-201ENST00000471472 736 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPL30P14-201ENST00000482744 348 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPL37P25-201ENST00000507308 276 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP60-201ENST00000516985 239 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPS3AP4-201ENST00000555161 764 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 NCAPGP2-201ENST00000557911 754 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC104763.2-201ENST00000604179 382 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 MIR6076-201ENST00000617521 113 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AL158209.2-201ENST00000619266 216 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC007998.5-201ENST00000622938 237 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC009093.8-201ENST00000641769 292 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 Y_RNA.41-201ENST00000362646 102 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 RNA5SP387-201ENST00000364226 106 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC114491.1-201ENST00000416095 246 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 DBIP2-201ENST00000419076 262 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 HMGN2P31-201ENST00000432430 273 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC002486.1-201ENST00000435098 391 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC093899.1-201ENST00000457984 376 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC023598.1-201ENST00000472521 361 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC084357.1-201ENST00000473404 255 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC079382.1-201ENST00000493346 557 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC108078.1-201ENST00000508073 725 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC091133.4-201ENST00000511142 308 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 RNA5SP290-201ENST00000517133 127 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 FAM92A1P1-201ENST00000528023 890 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC034105.3-201ENST00000565294 442 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 KLKP1-201ENST00000595979 403 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC008739.3-201ENST00000603262 127 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 AC006077.1-201ENST00000604746 343 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 MTND1P37-201ENST00000636562 264 ntBASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCN3Q9P1Z3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCN3Q9P1Z3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.4□□□□□ -1.86
HCN3Q9P1Z3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HCN3Q9P1Z3 UBE2L2-201ENST00000254302 429 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.3-201ENST00000362331 103 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU6-108P-201ENST00000365558 107 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU6-14P-201ENST00000384630 106 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 SNORA1.3-201ENST00000384676 136 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU4-55P-201ENST00000410731 137 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 SDCBPP3-201ENST00000419629 891 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 AC002075.2-201ENST00000425207 252 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 PRDX3P3-201ENST00000447765 522 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.87
HCN3Q9P1Z3 RNU6-953P-201ENST00000459154 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms