Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.66□□□□□ -2.14
PHRF1Q9P1Y6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.66□□□□□ -2.14
PHRF1Q9P1Y6 AL031601.2-202ENST00000622650 282 ntBASIC1.66□□□□□ -2.14
PHRF1Q9P1Y6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PHRF1Q9P1Y6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
PHRF1Q9P1Y6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC005297.2-201ENST00000450430 606 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 RPS27P21-201ENST00000486977 252 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC104685.1-201ENST00000502445 371 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 SNORA31.8-201ENST00000516327 108 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 RN7SKP265-201ENST00000516448 223 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-1073P-201ENST00000517182 106 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 GLYCAM1-201ENST00000546596 285 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 SETP7-201ENST00000552169 453 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 SNORD84-203ENST00000584275 78 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC097468.3-201ENST00000607956 456 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AL590282.1-201ENST00000610379 1136 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 AC135776.4-201ENST00000624300 1904 ntBASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PHRF1Q9P1Y6 ZNF37BP-203ENST00000452306 1352 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 UBE2FP3-201ENST00000436366 524 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC004062.1-201ENST00000509926 645 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC027104.1-201ENST00000563702 681 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC107954.1-201ENST00000565906 727 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC007229.1-201ENST00000590455 412 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 AC068831.7-201ENST00000616954 363 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 MTND5P10-201ENST00000603719 1809 ntBASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PHRF1Q9P1Y6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC130650.2-201ENST00000618736 2403 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-799P-201ENST00000363567 107 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC016769.3-201ENST00000396562 315 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AL591034.1-201ENST00000407447 340 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 OFD1P18Y-201ENST00000420889 959 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AL590233.1-201ENST00000430017 456 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC092685.1-201ENST00000447960 1243 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AL034418.1-201ENST00000448675 860 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 MIR514B-201ENST00000516774 80 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-889P-201ENST00000517189 103 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 SUMO2P14-201ENST00000604488 293 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AL355810.1-201ENST00000614629 552 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AL391597.1-201ENST00000618707 694 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 AC006963.1-201ENST00000624003 1052 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 MTND4P27-201ENST00000450813 1354 ntBASIC1.63□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-98P-201ENST00000384173 107 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 MTATP6P4-201ENST00000427725 675 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 MTCO1P48-201ENST00000448024 1096 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 RNF138P1-201ENST00000502765 546 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC004923.2-201ENST00000529649 369 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC073413.2-201ENST00000604332 360 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 MIR98-201ENST00000606724 119 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 RNU4-91P-201ENST00000364778 135 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 MTCYBP35-201ENST00000503630 1137 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 HMGB1P22-201ENST00000505315 124 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 MIR5000-201ENST00000577717 103 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 GLUD1P4-201ENST00000590914 418 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC106028.5-201ENST00000610332 395 ntBASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.62□□□□□ -2.15
PHRF1Q9P1Y6 AC007275.1-201ENST00000621243 671 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms