Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPL7P10-201ENST00000417407 739 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL160275.3-201ENST00000423876 471 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 SKA2P1-201ENST00000425592 390 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MTCO1P39-201ENST00000426148 480 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RPL32P28-201ENST00000443577 397 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 PRDX3P3-201ENST00000447765 522 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MTND1P17-201ENST00000448961 204 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC104472.2-201ENST00000469035 601 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC083829.1-201ENST00000503756 657 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC008526.1-201ENST00000509149 338 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 SNORA31.3-201ENST00000516029 96 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RNU6-1045P-201ENST00000516321 107 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 IGLV3-26-201ENST00000520756 302 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 TRAV8-5-201ENST00000537369 341 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 IMMP1LP2-201ENST00000552954 492 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL355836.1-201ENST00000555951 870 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL354984.3-201ENST00000604803 325 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL138726.1-201ENST00000614873 333 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL355365.1-201ENST00000616480 294 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MIR6830-201ENST00000636015 70 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.445-201ENST00000384168 102 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 MIR606-201ENST00000384851 96 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 SNORD66.1-201ENST00000391230 76 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL445189.1-201ENST00000405722 338 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 RPS12P24-201ENST00000412619 387 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC080125.1-201ENST00000414888 684 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 BX842559.1-201ENST00000419615 532 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL132765.1-201ENST00000434165 553 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 RPL23AP52-201ENST00000439311 478 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC117503.1-201ENST00000472241 394 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 S100A11P1-201ENST00000477525 312 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 MLLT10P2-201ENST00000506434 249 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC093303.1-201ENST00000514549 295 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP154-201ENST00000516193 111 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC100770.1-201ENST00000532310 322 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 ELOCP31-201ENST00000540463 467 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL352979.3-201ENST00000553515 247 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AC006270.2-201ENST00000578523 652 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 MIR15A-201ENST00000607334 83 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL138721.1-201ENST00000616756 179 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL731566.2-201ENST00000618971 317 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 AL356489.2-201ENST00000566968 3528 ntBASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCMF1Q9P0J7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AC090337.1-201ENST00000579651 2074 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU5A-1-201ENST00000362698 116 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU6-562P-201ENST00000362731 107 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.135-201ENST00000363439 95 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.146-201ENST00000363549 102 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP175-201ENST00000364275 119 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.09□□□□□ -1.75
KCMF1Q9P0J7 AL590704.1-201ENST00000402856 794 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms