Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 ELOCP29-201ENST00000588193 334 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 DNAJC19P3-201ENST00000594491 331 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC007619.2-201ENST00000605743 379 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC092574.1-201ENST00000609771 420 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC013562.2-201ENST00000611632 603 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AL442067.2-201ENST00000614033 363 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 HMGB1P24-202ENST00000615653 685 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC073346.2-201ENST00000624724 2058 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 ZNF833P-201ENST00000424938 1494 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 RNU6-853P-201ENST00000364306 107 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AL139039.1-201ENST00000401900 692 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC023141.4-201ENST00000412031 328 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 USP9YP33-201ENST00000412220 421 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 MTCYBP38-201ENST00000417160 1123 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 MTCO3P30-201ENST00000426425 670 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 USP9YP35-201ENST00000435696 412 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 MTCO3P45-201ENST00000443036 613 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 COX6CP12-201ENST00000446748 202 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 RNU7-26P-201ENST00000458980 63 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC080014.1-201ENST00000496877 1201 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC109329.2-201ENST00000519658 482 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AL359212.1-201ENST00000556608 614 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC009712.1-201ENST00000564938 316 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC024220.1-201ENST00000603675 484 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC239868.4-201ENST00000608318 671 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 OR10AB1P-201ENST00000609613 938 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC011890.2-201ENST00000613393 294 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC004777.1-201ENST00000624317 287 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CLN6Q9NWW5 AC007336.1-201ENST00000576365 3828 ntBASIC2.16□□□□□ -2.06
CLN6Q9NWW5 Z82209.1-201ENST00000422141 2135 ntBASIC2.15□□□□□ -2.06
CLN6Q9NWW5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.06
CLN6Q9NWW5 RNU6-750P-201ENST00000390946 107 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 CCNG1P1-201ENST00000406783 885 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 USP9YP13-201ENST00000417797 480 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 BTF3L4P3-201ENST00000418879 476 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 RPS25P9-201ENST00000435591 252 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 EEF1A1P39-201ENST00000440791 250 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 EEF1E1P1-201ENST00000446998 430 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 TPT1P14-201ENST00000448018 505 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 SNORD109B-201ENST00000458961 67 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 SNORD109A-201ENST00000459128 67 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC110760.3-202ENST00000515177 371 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 RN7SKP24-201ENST00000515888 284 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AP000889.2-201ENST00000532684 490 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 YWHAZP1-201ENST00000556286 722 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC023824.2-201ENST00000566185 400 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC105137.2-201ENST00000569073 466 ntBASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.15□□□□□ -2.07
CLN6Q9NWW5 VN1R92P-201ENST00000598511 928 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms