Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AL355375.2-201ENST00000574825 175 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR3921-201ENST00000577308 85 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR4277-201ENST00000578298 84 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR5096-201ENST00000583713 70 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR4719-201ENST00000585233 84 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR3942-201ENST00000585264 109 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC106900.2-201ENST00000604994 317 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AL353621.2-201ENST00000605340 133 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC034102.8-201ENST00000615146 484 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC114781.5-201ENST00000615297 108 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RMST_9.1-201ENST00000619945 193 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AL512643.1-201ENST00000635735 524 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC006026.1-201ENST00000444025 1803 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AL133243.3-201ENST00000617415 3004 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 SNORA51.2-201ENST00000364595 132 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 RNA5SP189-201ENST00000364920 115 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 RNA5SP366-201ENST00000365454 123 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 RPL37P18-201ENST00000411602 243 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 USP9YP20-201ENST00000419224 558 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 COX6B1P7-201ENST00000430845 235 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC006011.1-201ENST00000442758 349 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 SNORA19.2-201ENST00000516013 114 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 OR11H5P-201ENST00000554039 926 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC006270.2-201ENST00000578523 652 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 Z99571.1-201ENST00000636677 394 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
RLIMQ9NVW2 ZNF285B-201ENST00000561698 1767 ntBASIC3.79□□□□□ -1.8
RLIMQ9NVW2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.67-201ENST00000362870 100 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.167-201ENST00000363735 109 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU6-82P-201ENST00000363970 107 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU6-1013P-201ENST00000384180 107 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU6-434P-201ENST00000384376 107 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AL590704.1-201ENST00000402856 794 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AL139397.2-201ENST00000404529 772 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC245028.1-201ENST00000423259 256 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 DNAJC19P7-201ENST00000428811 344 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AL591704.1-201ENST00000432574 275 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 VDAC1P3-201ENST00000434069 851 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AL356535.1-201ENST00000440335 398 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AL121877.1-201ENST00000453704 622 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU7-66P-201ENST00000459469 62 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RPS15AP34-201ENST00000487776 387 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 FGF7P4-201ENST00000509595 295 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC005921.1-201ENST00000510589 286 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC093840.1-201ENST00000511599 336 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC099522.1-202ENST00000514718 367 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 SNORA70.16-201ENST00000516390 95 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU7-143P-201ENST00000516781 65 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 RNU6-143P-201ENST00000516942 93 ntBASIC3.78□□□□□ -1.8
RLIMQ9NVW2 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
RLIMQ9NVW2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms