Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORA75B-201ENST00000384053 137 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 RNU6-1029P-201ENST00000384109 107 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 RNA5SP372-201ENST00000390836 115 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AL356421.1-201ENST00000403255 413 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AL160275.2-201ENST00000412010 394 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 CRYBB2P1-203ENST00000415709 538 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 snoU13.7-201ENST00000459220 104 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 PABPC1P3-201ENST00000469174 459 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 RPL22P13-201ENST00000493291 347 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 HMGB1P21-201ENST00000502313 581 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 RN7SKP82-201ENST00000516786 223 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC007375.1-201ENST00000554513 578 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC067852.4-201ENST00000590314 478 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 HSPE1P14-201ENST00000605812 302 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 SNORA51-201ENST00000606420 132 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 AC103710.2-201ENST00000609912 942 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 uc_338.34-201ENST00000617467 174 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC121333.1-201ENST00000567488 2709 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 HSPE1P11-201ENST00000339579 310 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 Y_RNA.80-201ENST00000362996 102 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 SNORD113-7-201ENST00000363762 77 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 RNU6-921P-201ENST00000384361 107 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 Y_RNA.552-201ENST00000384665 112 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 MIR558-201ENST00000384920 94 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AL590704.1-201ENST00000402856 794 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 RNU2-29P-201ENST00000410423 189 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 ARL5AP1-201ENST00000418991 388 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AL139396.1-201ENST00000421137 167 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 RAC1P6-201ENST00000423911 575 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 YME1L1P1-201ENST00000429435 297 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 RPL36P19-201ENST00000430744 301 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 HMGB1P15-201ENST00000453854 435 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 MTCO3P2-201ENST00000457365 171 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 RNU7-182P-201ENST00000459009 62 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 AP000893.1-201ENST00000474462 794 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 Y_RNA.654-201ENST00000497848 106 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC020893.1-201ENST00000502452 580 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 VN1R104P-201ENST00000505115 1009 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AP000889.1-201ENST00000530968 660 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC138761.3-201ENST00000579993 334 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 MIR6868-201ENST00000611215 58 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 DUSP12P1-201ENST00000612874 516 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 uc_338.12-201ENST00000616344 181 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC067931.1-201ENST00000624190 671 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 AC244517.1-201ENST00000606030 2086 ntBASIC5.31□□□□□ -1.56
ATG3Q9NT62 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATG3Q9NT62 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG3Q9NT62 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG3Q9NT62 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 Y_RNA.212-201ENST00000364177 102 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 RNY3P13-201ENST00000365542 102 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 SNORA51.6-201ENST00000384151 125 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 SNORA19-201ENST00000384737 128 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 OR6C66P-201ENST00000414917 930 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 RBMY1KP-201ENST00000423480 476 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 HMGB1P9-201ENST00000429856 646 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 TIMM9P1-201ENST00000436122 256 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 MTCO3P45-201ENST00000443036 613 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 RPL7P52-201ENST00000449200 742 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC079140.5-201ENST00000507882 310 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 RNU6-408P-201ENST00000515910 100 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms