Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 GXYLT1P1-201ENST00000446657 490 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 RNU6-420P-201ENST00000458780 107 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 RNU7-140P-201ENST00000459546 60 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 HMGB1P14-201ENST00000557424 591 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.33□□□□□ -2.04
USP42Q9H9J4 DUXAP9-208ENST00000622815 614 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 AC135776.4-201ENST00000624300 1904 ntBASIC2.33□□□□□ -2.04
USP42Q9H9J4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP42Q9H9J4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP42Q9H9J4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 WWP1P1-201ENST00000466609 2769 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 MTND4P1-201ENST00000457501 1466 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP42Q9H9J4 HSPE1P11-201ENST00000339579 310 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 RNU5A-1-201ENST00000362698 116 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 RNY1P10-201ENST00000363268 113 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 MTCO3P1-205ENST00000422088 832 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 OR51B8P-201ENST00000449892 769 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC092757.1-201ENST00000467293 467 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC107393.1-201ENST00000512403 346 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC117532.1-201ENST00000514638 323 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 RNU6-1102P-201ENST00000516149 96 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 HMGN1P28-201ENST00000521340 364 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 SETP7-201ENST00000552169 453 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 MIR3935-201ENST00000583472 104 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC005498.1-201ENST00000592125 465 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 RPP40P2-201ENST00000603596 712 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC024560.3-201ENST00000608482 349 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC011330.2-201ENST00000621680 635 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 AC010872.1-201ENST00000624225 675 ntBASIC2.32□□□□□ -2.04
USP42Q9H9J4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 MIR337-201ENST00000362281 93 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 U3.20-201ENST00000390909 217 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 TAF13P2-201ENST00000416876 286 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AL365496.1-201ENST00000426885 215 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AL512844.2-201ENST00000433990 593 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 AL445687.1-201ENST00000439946 251 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 EIF4EP3-201ENST00000498782 656 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USP42Q9H9J4 GLYCAM1-201ENST00000546596 285 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 LARP7P2-201ENST00000575306 125 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 ZNF92P2-201ENST00000600543 1059 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 AC002487.1-201ENST00000604565 994 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 OR10AB1P-201ENST00000609613 938 ntBASIC2.31□□□□□ -2.04
USP42Q9H9J4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.31□□□□□ -2.04
USP42Q9H9J4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 SNORA67.5-201ENST00000391036 107 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 ANAPC10P1-201ENST00000395991 556 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 RPL17P12-201ENST00000413391 526 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL158050.1-201ENST00000416077 457 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 SFR1P2-201ENST00000421841 730 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL358075.3-201ENST00000426289 226 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL512637.2-201ENST00000431287 1256 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC087588.1-201ENST00000462203 316 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC090096.1-201ENST00000489168 390 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC025768.1-201ENST00000510057 267 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 AP005137.2-201ENST00000609238 400 ntBASIC2.3□□□□□ -2.04
USP42Q9H9J4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.3□□□□□ -2.04
USP42Q9H9J4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms