Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC140479.3-201ENST00000418944 1126 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AL590632.1-201ENST00000424289 371 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC008065.1-201ENST00000428525 348 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC096644.2-201ENST00000429278 159 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 HIGD1AP11-201ENST00000438361 280 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 HMGB1P12-201ENST00000438594 598 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 FABP5P13-201ENST00000452144 328 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 SCARNA10-201ENST00000459255 330 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RPS23P7-201ENST00000466210 444 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC117503.1-201ENST00000472241 394 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RN7SL283P-201ENST00000489055 303 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC025445.1-201ENST00000502728 300 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 Y_RNA.661-201ENST00000516003 99 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RNU1-54P-201ENST00000517181 120 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AP002404.1-201ENST00000532005 451 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 MIR4277-201ENST00000578298 84 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RN7SL690P-201ENST00000582087 240 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 MIR4715-201ENST00000584117 79 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC174048.1-201ENST00000603389 144 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 PRR13P7-201ENST00000605538 430 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 AL732372.2-225ENST00000642124 456 ntBASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXP3Q9BZS1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 AC139713.2-214ENST00000642059 1811 ntBASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
FOXP3Q9BZS1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RNU1-15P-201ENST00000353977 144 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RNU6-490P-201ENST00000362985 107 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.188-201ENST00000363952 111 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RNU6-784P-201ENST00000384330 106 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 U3.22-201ENST00000391120 215 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC008267.5-201ENST00000424928 265 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC093151.1-201ENST00000427711 313 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 ELOCP18-201ENST00000434209 337 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC016831.4-201ENST00000438302 307 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 GSTA11P-201ENST00000452866 669 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC103987.1-201ENST00000473394 348 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC026801.1-201ENST00000497178 464 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RNU6-1332P-201ENST00000516666 104 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 IGLV3-26-201ENST00000520756 302 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC105129.1-201ENST00000560250 297 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 RPL23AP97-201ENST00000568955 471 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 MIR4512-201ENST00000583257 77 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXP3Q9BZS1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 NOL8P1-201ENST00000508336 3529 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 SET-203ENST00000372688 801 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 AC068538.1-201ENST00000376856 336 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.455-201ENST00000384230 98 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 NDUFS5P1-201ENST00000405668 289 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 RNA5SP56-201ENST00000410277 118 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 RPL21P109-201ENST00000422213 475 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 AL391219.1-201ENST00000422570 483 ntBASIC4.64□□□□□ -1.67
FOXP3Q9BZS1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms