Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR8076-201ENST00000611401 83 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC008873.1-201ENST00000625051 138 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC008568.2-201ENST00000623862 2313 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AL138820.1-201ENST00000617901 5305 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.309-201ENST00000365046 111 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 RNU6-514P-201ENST00000384208 107 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 RNU4-65P-201ENST00000410473 140 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 Z92545.1-201ENST00000411782 234 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AL590399.2-201ENST00000427536 309 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AC005002.2-201ENST00000438228 269 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AC005840.1-201ENST00000498412 377 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AC104581.2-201ENST00000572227 430 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 MIR5692C2-201ENST00000577959 77 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 SRGNP1-201ENST00000603392 451 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 RNU6-156P-201ENST00000621869 107 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 RAD17P1-201ENST00000418130 2042 ntBASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL25A1Q9BXS0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.571-201ENST00000384753 98 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AL357139.1-201ENST00000407792 426 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 RNU4-30P-201ENST00000410245 143 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC116036.1-201ENST00000412199 367 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC016831.4-201ENST00000438302 307 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 UQCRBP2-201ENST00000447827 297 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AL162389.1-201ENST00000449233 177 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC079354.2-201ENST00000453523 154 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 ANXA2P1-201ENST00000505539 926 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 RN7SL802P-201ENST00000577858 299 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 IPO5P1-202ENST00000600039 287 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC123912.5-201ENST00000605470 343 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 AC096577.2-201ENST00000611455 153 ntBASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL25A1Q9BXS0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms