Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHOX2BQ99453 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHOX2BQ99453 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PHOX2BQ99453 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHOX2BQ99453 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.73□□□□□ -1.49
PHOX2BQ99453 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHOX2BQ99453 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC025031.4-201ENST00000621248 3271 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHOX2BQ99453 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC090740.1-201ENST00000623193 2262 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC100757.1-201ENST00000616872 1835 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 AL159987.1-201ENST00000347911 293 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RNA5SP505-201ENST00000364748 108 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 Y_RNA.286-201ENST00000364813 102 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RNA5SP235-201ENST00000365411 114 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 Y_RNA.441-201ENST00000384123 112 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 U3.36-201ENST00000408418 213 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RN7SKP17-201ENST00000411242 351 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC007919.1-201ENST00000429380 217 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC096638.1-201ENST00000444678 216 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 NUTF2P7-201ENST00000453086 375 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 SNORD2.1-201ENST00000458762 69 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AP000870.1-201ENST00000472927 406 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RPL23AP49-201ENST00000492925 468 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC091959.1-201ENST00000495857 238 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RNU6-479P-201ENST00000516348 105 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RNA5SP165-201ENST00000517142 115 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 RN7SKP147-201ENST00000517154 244 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 MTND5P41-201ENST00000517498 206 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AP004371.1-201ENST00000525240 214 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC136624.4-201ENST00000573044 370 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC104465.1-201ENST00000611365 139 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 AC005296.1-201ENST00000616145 209 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.72□□□□□ -1.49
PHOX2BQ99453 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHOX2BQ99453 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
PHOX2BQ99453 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHOX2BQ99453 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.71□□□□□ -1.49
PHOX2BQ99453 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PHOX2BQ99453 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PHOX2BQ99453 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
PHOX2BQ99453 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PHOX2BQ99453 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 AL034549.2-201ENST00000618285 3373 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 Y_RNA.343-201ENST00000365354 112 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 RNU6-1289P-201ENST00000384431 106 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 MIR1193-201ENST00000408109 78 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 SNORA11F-201ENST00000408237 128 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 AL590399.2-201ENST00000427536 309 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 AC079780.1-201ENST00000428259 207 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 AC139453.3-201ENST00000493276 369 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 AC021678.3-201ENST00000517893 476 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 AC024153.1-201ENST00000603103 365 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 AL138963.2-201ENST00000605137 226 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 MIR92B-201ENST00000607575 96 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 MAPK10-304ENST00000641341 3984 ntBASIC5.71□□□□□ -1.5
PHOX2BQ99453 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.71□□□□□ -1.5
PHOX2BQ99453 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PHOX2BQ99453 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 RNA5SP335-201ENST00000363817 110 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 Y_RNA.398-201ENST00000383952 99 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 Y_RNA.570-201ENST00000384750 101 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms