Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RNU6-181P-201ENST00000363225 107 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RNU1-32P-201ENST00000363937 159 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RNU6-190P-201ENST00000384154 102 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RPL18P10-201ENST00000425606 538 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AL592045.1-201ENST00000429867 352 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RPL36AP53-201ENST00000432891 316 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC091167.1-201ENST00000492017 396 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RNU6-445P-201ENST00000516949 107 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC024619.4-201ENST00000580924 316 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC087683.1-201ENST00000591187 441 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 ARF4P1-201ENST00000605447 541 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AL121992.2-201ENST00000606262 256 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 DUSP12P1-201ENST00000612874 516 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC011939.3-201ENST00000613686 466 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC130324.3-201ENST00000614165 542 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC114781.5-201ENST00000615297 108 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC006338.2-201ENST00000616864 791 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 MIR7703-201ENST00000620784 77 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC138649.3-201ENST00000622154 254 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AC068880.5-201ENST00000624331 290 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 LRRC77P-213ENST00000637727 880 ntBASIC3.17□□□□□ -1.9
CMTM3Q96MX0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
CMTM3Q96MX0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 RNU6-282P-201ENST00000365357 103 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.436-201ENST00000384097 102 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 RNU6-1042P-201ENST00000384204 107 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.582-201ENST00000391023 95 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AL358934.1-201ENST00000432346 324 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 MTATP6P16-201ENST00000434543 526 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC132479.1-201ENST00000449160 144 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 FABP5P13-201ENST00000452144 328 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 C1DP4-201ENST00000455429 424 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC105137.1-201ENST00000484355 562 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC116562.3-201ENST00000506136 177 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 MTCO3P7-201ENST00000510008 774 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC108078.2-201ENST00000510750 236 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 SNORA31.9-201ENST00000516429 84 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 RNU6-405P-201ENST00000516637 110 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC068587.5-201ENST00000528506 175 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 MTCO3P24-201ENST00000572729 782 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC068790.4-201ENST00000602474 263 ntBASIC3.16□□□□□ -1.9
CMTM3Q96MX0 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms