Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AL122016.1-201ENST00000403365 367 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AL590365.1-201ENST00000450788 243 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AP000797.1-201ENST00000478870 387 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC114797.1-201ENST00000514003 728 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC022616.6-201ENST00000520479 119 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC093012.1-202ENST00000549403 582 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 MRPS36P5-201ENST00000551909 298 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 LARP7P3-201ENST00000579888 337 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 KC877982.1-201ENST00000602313 470 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC104010.1-201ENST00000616889 150 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 AC008147.4-201ENST00000617570 1204 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 API5P2-201ENST00000397055 1498 ntBASIC3.2□□□□□ -1.9
HDAC11Q96DB2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC11Q96DB2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL359634.1-202ENST00000404721 284 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 MIR1289-1-201ENST00000408836 144 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 USP9YP13-201ENST00000417797 480 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 MTND1P26-201ENST00000440488 538 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 TRIM60P18-201ENST00000441518 828 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 MTATP6P30-201ENST00000443540 664 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC020550.1-201ENST00000447385 163 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 RPS20P22-201ENST00000473700 357 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 KC877373.1-201ENST00000479066 408 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 RNA5SP291-201ENST00000517222 105 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 HMGB1P14-201ENST00000557424 591 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 TRAV28-201ENST00000557548 323 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 MIR4293-201ENST00000584305 78 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC083760.1-201ENST00000589621 670 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC121334.2-201ENST00000605387 271 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC091931.1-201ENST00000623488 728 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 AC068057.2-201ENST00000624047 895 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
HDAC11Q96DB2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC11Q96DB2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AL365361.1-201ENST00000566942 3481 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 RNU5E-5P-201ENST00000365379 116 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 RNY3P13-201ENST00000365542 102 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 ELOCP17-201ENST00000414751 326 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AL353678.1-201ENST00000422735 741 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 MTATP6P17-201ENST00000431030 672 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 Z82210.1-201ENST00000440037 231 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 BNIP3P2-201ENST00000441221 577 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC109486.1-201ENST00000486833 374 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 HMGB1P6-201ENST00000569046 646 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.18□□□□□ -1.9
HDAC11Q96DB2 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 GLUD1P4-201ENST00000590914 418 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AC008277.2-201ENST00000605196 797 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AL031775.1-201ENST00000607014 887 ntBASIC3.18□□□□□ -1.9
HDAC11Q96DB2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms