Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 MTND4P35-201ENST00000604257 1375 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 SNORA7.2-201ENST00000364446 145 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 Y_RNA.615-201ENST00000410769 117 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 MTCO3P46-201ENST00000425787 232 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC087650.1-201ENST00000431445 468 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 RPL21P112-201ENST00000434403 463 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 IFNA20P-201ENST00000436840 528 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 snoU13.4-201ENST00000458916 104 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 RPL21P11-201ENST00000461458 483 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC108860.1-201ENST00000484521 383 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC117522.3-201ENST00000507974 584 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC026726.1-201ENST00000512859 601 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 RNU6-123P-201ENST00000516163 102 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 Y_RNA.689-201ENST00000516589 107 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 RNU6-1314P-201ENST00000517139 104 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC087241.2-201ENST00000535801 324 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC005668.1-201ENST00000571142 476 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC053481.4-201ENST00000583164 216 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 MIR4424-201ENST00000585257 86 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL020997.2-201ENST00000602607 184 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL592436.1-201ENST00000605135 558 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC110741.2-201ENST00000605278 268 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC012409.4-201ENST00000612923 249 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL390240.1-201ENST00000612950 384 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL591424.2-201ENST00000617023 128 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AL136221.1-201ENST00000621449 509 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 MIR6500-201ENST00000622700 86 ntBASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.64□□□□□ -1.83
CTHRC1Q96CG8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AL157700.1-201ENST00000561973 1432 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AP004289.2-201ENST00000444413 1457 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 SNORD81.2-201ENST00000365153 76 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RNU4-20P-201ENST00000365601 151 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RNU6-116P-201ENST00000384042 109 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RN7SKP140-201ENST00000411196 284 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RPL17P36-201ENST00000420302 549 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RANP8-201ENST00000444720 713 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RPL23AP31-201ENST00000456160 467 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC078918.1-201ENST00000498515 228 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RBBP4P6-201ENST00000508098 202 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RNU6-685P-201ENST00000517088 95 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RN7SKP256-201ENST00000517201 314 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 SNRPGP16-201ENST00000533275 226 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC106782.4-201ENST00000568264 210 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 RN7SL703P-201ENST00000578485 302 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC243960.4-201ENST00000600532 288 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC087045.1-201ENST00000605856 382 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC022140.2-201ENST00000623500 188 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AP001350.1-201ENST00000601906 1524 ntBASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms