Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SH3KBP1Q96B97 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SH3KBP1Q96B97 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RNU6-511P-201ENST00000363496 107 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RNU6-456P-201ENST00000384493 107 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 MIR218-2-201ENST00000385006 110 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 MIR514A1-201ENST00000385133 98 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL359634.1-202ENST00000404721 284 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC133104.1-201ENST00000429100 218 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 USP12PX-201ENST00000432383 1057 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL136380.1-201ENST00000447970 162 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 MTCYBP1-201ENST00000454315 1119 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL359385.1-201ENST00000456509 365 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC107401.1-201ENST00000503426 685 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 KCTD9P5-201ENST00000504141 1170 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC110768.1-201ENST00000509222 400 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC104619.4-201ENST00000510773 249 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RNU6-720P-201ENST00000516363 108 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RNU2-10P-201ENST00000516375 211 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 SCARNA24.1-201ENST00000516465 137 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 RANP9-201ENST00000519957 271 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC100870.1-201ENST00000522035 505 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AC084757.4-201ENST00000616350 526 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL158209.2-201ENST00000619266 216 ntBASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SH3KBP1Q96B97 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SH3KBP1Q96B97 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.84
SH3KBP1Q96B97 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SH3KBP1Q96B97 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SH3KBP1Q96B97 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 RNU6-1215P-201ENST00000384441 102 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 GSTA9P-201ENST00000406231 611 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AL590383.1-201ENST00000428602 75 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 MTCO2P29-201ENST00000465212 189 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 RPL7P5-201ENST00000471472 736 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC026427.2-201ENST00000506228 536 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC007991.1-201ENST00000522680 631 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 GLUD1P4-201ENST00000590914 418 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC068790.2-201ENST00000602601 557 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 AC058791.1-201ENST00000608412 3198 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SH3KBP1Q96B97 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 SNORA63.1-201ENST00000362493 131 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 RNA5SP139-201ENST00000364340 117 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 RNU6-1027P-201ENST00000383998 107 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 NDUFS5P1-201ENST00000405668 289 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 MRPL50P2-201ENST00000416821 482 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 BTF3L4P3-201ENST00000418879 476 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.57□□□□□ -1.84
SH3KBP1Q96B97 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms