Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTCO1P47-201ENST00000523889 1271 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AL157394.1-201ENST00000562983 1224 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 MIR3915-201ENST00000578518 97 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC002064.3-201ENST00000623448 346 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 MIR1193-201ENST00000408109 78 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 RNU2-68P-201ENST00000410878 191 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL356583.2-201ENST00000426536 280 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC137499.1-201ENST00000427602 88 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 HSPD1P21-201ENST00000436541 245 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 HMGB3P12-201ENST00000438745 556 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL445567.1-201ENST00000439121 144 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 RPS24P13-201ENST00000442520 397 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 COX6CP12-201ENST00000446748 202 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 WASF1P1-201ENST00000447560 1131 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 PRDX3P3-201ENST00000447765 522 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC098826.2-201ENST00000452011 651 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 CECR9-201ENST00000453421 199 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC026801.1-201ENST00000497178 464 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 SUMO2P6-201ENST00000505273 288 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 MTND4LP31-201ENST00000514859 294 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 PAICSP4-201ENST00000517543 1253 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AP003467.2-201ENST00000520175 319 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC138915.1-201ENST00000565427 1685 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC106785.1-201ENST00000565935 262 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC025281.1-201ENST00000567026 265 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 ROCK1P1-201ENST00000573767 549 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 MIR4697-201ENST00000582977 78 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC005498.1-201ENST00000592125 465 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC010620.2-201ENST00000600135 313 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AL358072.1-201ENST00000604156 575 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC007619.2-201ENST00000605743 379 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 DUSP12P1-201ENST00000612874 516 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC039056.2-201ENST00000622261 511 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC099506.2-201ENST00000623074 221 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 AC084035.1-201ENST00000634543 607 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 U2.21-201ENST00000637295 81 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 OR8B1P-202ENST00000641132 1178 ntBASIC3.06□□□□□ -1.92
VPS33AQ96AX1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 Y_RNA.169-201ENST00000363745 96 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNU6-14P-201ENST00000384630 106 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 MRPL42P2-201ENST00000403169 426 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNU2-36P-201ENST00000410361 191 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RPL26P27-201ENST00000414397 437 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RPS15AP12-201ENST00000419498 388 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC098614.2-201ENST00000426040 255 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC009414.1-201ENST00000427200 443 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 GTF2IP20-201ENST00000431663 360 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC122718.1-201ENST00000439448 744 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL358232.1-201ENST00000448030 501 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNU6-953P-201ENST00000459154 107 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC113155.1-201ENST00000511141 769 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 RNA5SP165-201ENST00000517142 115 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC087373.1-201ENST00000524920 491 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 OR5B10P-201ENST00000532869 642 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms