Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 OR4G2P-202ENST00000641004 1759 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AL161781.1-201ENST00000354277 403 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 SNORA36C-201ENST00000384289 132 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 SNORA41-201ENST00000384675 132 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MTCO2P21-201ENST00000419780 677 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 NUP35P1-201ENST00000422734 947 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC009296.1-201ENST00000443146 155 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AL049714.1-201ENST00000466686 347 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 HSPE1P6-201ENST00000479457 291 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 RPL23AP70-201ENST00000483361 460 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 LTV1P1-201ENST00000510683 1237 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC024589.1-201ENST00000512207 263 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 RN7SKP40-201ENST00000517211 242 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC105185.1-201ENST00000518705 535 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 UBTFL10-201ENST00000528532 562 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC023538.1-201ENST00000534576 736 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MIR4760-201ENST00000585040 80 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 VN1R82P-201ENST00000601481 356 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC013553.2-201ENST00000604244 589 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC011330.2-201ENST00000621680 635 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC027309.3-201ENST00000623419 351 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC068880.5-201ENST00000624331 290 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC099063.3-201ENST00000642066 185 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 AC087359.1-201ENST00000508335 1740 ntBASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTN4IP1Q8WWV3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 DEFB108F-201ENST00000344638 222 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RNU5A-1-201ENST00000362698 116 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-853P-201ENST00000364306 107 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-359P-201ENST00000365466 108 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MIR27B-201ENST00000385129 97 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MIR325-201ENST00000385260 98 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RPS4XP7-201ENST00000406274 780 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 CCDC58P2-201ENST00000417131 366 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL109933.2-201ENST00000452651 260 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL135752.1-201ENST00000479477 471 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC004924.1-201ENST00000480160 781 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RN7SL432P-201ENST00000484057 298 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC112673.1-201ENST00000513168 575 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 RN7SKP265-201ENST00000516448 223 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AP003467.2-201ENST00000520175 319 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC103783.1-201ENST00000520506 373 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 DEFB108D-201ENST00000527787 222 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC087465.1-201ENST00000560574 245 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC093536.2-201ENST00000565257 1406 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC011260.1-201ENST00000578420 472 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC103810.1-201ENST00000579873 453 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC068313.1-201ENST00000604028 1008 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AL031281.1-201ENST00000604049 488 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC097468.3-201ENST00000607956 456 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC103710.4-201ENST00000609301 899 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 AC079597.1-201ENST00000624306 508 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms