Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 YWHAQP7-201ENST00000603536 658 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AL009028.1-201ENST00000604895 802 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AL121917.1-203ENST00000605534 577 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC023510.2-201ENST00000622162 746 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC006963.1-201ENST00000624003 1052 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 AC090897.3-201ENST00000636973 1157 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 CKAP2P1-201ENST00000555477 2049 ntBASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM3Q8TF72 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 RNU5D-1-201ENST00000363299 116 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 SNORA72.3-201ENST00000365074 132 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 RNU6-730P-201ENST00000383954 104 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 ELOCP9-201ENST00000418624 239 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 ANKRD26P4-201ENST00000455755 950 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC108729.1-201ENST00000487812 947 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC113347.3-201ENST00000509113 148 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC117532.1-201ENST00000514638 323 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MTND1P24-201ENST00000552175 861 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AL132857.1-201ENST00000555180 708 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AL132657.2-201ENST00000564417 358 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC234772.3-201ENST00000602277 528 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC131235.4-201ENST00000609288 620 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 Y_RNA.122-201ENST00000363331 96 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 RNU6-83P-201ENST00000384568 112 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MIR499A-201ENST00000384903 122 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 RNU6-1300P-201ENST00000391046 108 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AL139098.1-201ENST00000407291 389 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MIR1250-201ENST00000408098 113 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC068533.2-201ENST00000411872 306 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 RPS15AP40-201ENST00000419621 391 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 VN1R10P-201ENST00000447106 875 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 SNRPFP4-201ENST00000456366 242 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC021146.8-201ENST00000507455 733 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 EEF1B2P4-201ENST00000551398 348 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 MIR4446-201ENST00000578505 67 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC022662.1-201ENST00000580252 331 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 VIS1.1-201ENST00000610517 203 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC091834.1-201ENST00000614543 472 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 AC116618.1-201ENST00000634617 774 ntBASIC2.05□□□□□ -2.08
SHROOM3Q8TF72 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 Y_RNA.465-201ENST00000384293 102 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 Y_RNA.493-201ENST00000384422 102 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 RNU6-1122P-201ENST00000384449 107 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 SNORD116-23-201ENST00000384645 92 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AL023807.1-201ENST00000407932 359 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC073264.1-201ENST00000411508 416 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 TIMM9P2-201ENST00000419324 266 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 USP9YP24-201ENST00000434374 697 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 RPL23AP76-201ENST00000441860 458 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 USP9YP17-201ENST00000444617 696 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 DUXAP8-207ENST00000456786 622 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC005410.1-202ENST00000460347 485 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 RPS15AP17-201ENST00000470598 390 ntBASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM3Q8TF72 AC110792.2-201ENST00000510278 224 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms