Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC092017.2-201ENST00000427600 362 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 DDX3P2-201ENST00000446138 111 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 CACYBPP2-201ENST00000453625 678 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC234775.1-201ENST00000454247 670 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC007967.1-201ENST00000455422 1159 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AL356010.1-201ENST00000456364 102 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC233702.1-201ENST00000482905 502 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 MTCO2P30-201ENST00000503662 364 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 RNU6-64P-201ENST00000517119 105 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 HMGB1P41-201ENST00000520234 440 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC007991.1-201ENST00000522680 631 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 FAM60DP-201ENST00000524174 632 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 DEFB108D-201ENST00000527787 222 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC126177.3-201ENST00000551839 688 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 MIR5187-201ENST00000583479 76 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC010928.3-201ENST00000587712 541 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AP001429.1-201ENST00000602568 530 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC093838.1-201ENST00000613014 469 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC006504.8-201ENST00000621046 635 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 AC006020.1-201ENST00000420179 1854 ntBASIC3.35□□□□□ -1.87
CLIP4Q8N3C7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 NACAP2-201ENST00000318548 624 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RPL7P26-201ENST00000333817 754 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 HSPE1P11-201ENST00000339579 310 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RNU6-511P-201ENST00000363496 107 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RNU6-996P-201ENST00000365438 107 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 Y_RNA.367-201ENST00000365544 101 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RNU4-48P-201ENST00000365559 182 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RNU6-754P-201ENST00000391166 107 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RPL32P23-201ENST00000397237 405 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RN7SKP156-201ENST00000410308 342 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RN7SKP159-201ENST00000410657 292 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 MTND4P28-201ENST00000426217 387 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AL158071.1-201ENST00000430315 461 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 ATP5JP1-201ENST00000431631 322 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 UBE2V1P7-201ENST00000446395 340 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC068587.1-201ENST00000483613 781 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RPS15AP36-201ENST00000492022 382 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC078918.1-201ENST00000498515 228 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC026427.2-201ENST00000506228 536 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RNU7-51P-201ENST00000516560 62 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RN7SKP289-201ENST00000517244 295 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC103783.1-201ENST00000520506 373 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 HMGN1P28-201ENST00000521340 364 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 RAB11AP2-201ENST00000545905 639 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 ARL2BPP2-201ENST00000550907 489 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 HSPE1P5-201ENST00000561489 272 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC006270.2-201ENST00000578523 652 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC015917.1-201ENST00000579654 510 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 C8orf59P2-201ENST00000603441 271 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 AC093648.1-201ENST00000623546 606 ntBASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLIP4Q8N3C7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
CLIP4Q8N3C7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms