Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC108145.1-201ENST00000503770 153 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC108043.1-201ENST00000512696 574 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.720-201ENST00000517166 92 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 RN7SKP295-201ENST00000517264 153 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AL355836.1-201ENST00000555951 870 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC012119.1-201ENST00000603184 222 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC174048.1-201ENST00000603389 144 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC009229.3-201ENST00000608056 282 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC140113.4-201ENST00000622087 222 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AC140479.6-201ENST00000633535 357 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TRIM48Q8IWZ4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC138393.1-203ENST00000327086 343 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.112-201ENST00000363250 102 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1309P-201ENST00000363305 108 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.133-201ENST00000363428 110 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-76P-201ENST00000384060 104 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-890P-201ENST00000384121 107 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 MIR3065-201ENST00000390137 79 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RPL7P10-201ENST00000417407 739 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 BX842559.1-201ENST00000419615 532 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC091390.1-201ENST00000433904 331 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL121871.1-201ENST00000443413 436 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 MTND5P22-201ENST00000458380 195 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RPL7P42-201ENST00000481005 679 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC108022.1-201ENST00000493466 478 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC097473.1-201ENST00000508142 408 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 PARP4P3-201ENST00000510265 317 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 GMPSP1-201ENST00000514075 579 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RN7SKP122-201ENST00000515923 296 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RN7SKP258-201ENST00000517151 304 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL121603.1-201ENST00000553815 142 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 MTCO3P23-201ENST00000561363 289 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 RPL23AP87-202ENST00000573039 466 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 MIR3939-201ENST00000582614 106 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC010680.4-201ENST00000605334 543 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC023043.4-201ENST00000612081 449 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC133104.2-201ENST00000615272 193 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC114781.5-201ENST00000615297 108 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC098657.3-201ENST00000620434 263 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL353748.2-201ENST00000622148 471 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AC022418.1-201ENST00000624118 445 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL732372.2-225ENST00000642124 456 ntBASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM48Q8IWZ4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 MIR331-201ENST00000362302 94 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 Y_RNA.404-201ENST00000383978 102 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 SNORA75B-201ENST00000384053 137 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RNU6-306P-201ENST00000384617 107 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 RPS12P24-201ENST00000412619 387 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AL591704.1-201ENST00000432574 275 ntBASIC4.28□□□□□ -1.72
TRIM48Q8IWZ4 AC009963.2-201ENST00000453431 138 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms