Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.1□□□□□ -1.59
USP48Q86UV5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.1□□□□□ -1.59
USP48Q86UV5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 MIR448-201ENST00000362131 111 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-82P-201ENST00000363970 107 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 Y_RNA.378-201ENST00000365652 113 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RHOT1P2-201ENST00000366423 333 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-1279P-201ENST00000383917 103 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-629P-201ENST00000384061 103 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-190P-201ENST00000384154 102 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 SNORA9-201ENST00000384215 133 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 Y_RNA.474-201ENST00000384341 102 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-831P-201ENST00000384548 107 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.1□□□□□ -1.59
USP48Q86UV5 BTF3L4P3-201ENST00000418879 476 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.1□□□□□ -1.59
USP48Q86UV5 MTND2P23-201ENST00000422990 651 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 MTCO2P12-201ENST00000427426 682 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 SAR1AP4-201ENST00000429225 591 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.1□□□□□ -1.59
USP48Q86UV5 HMGB1P18-201ENST00000438801 619 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AC020550.1-201ENST00000447385 163 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.1□□□□□ -1.59
USP48Q86UV5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.1□□□□□ -1.59
USP48Q86UV5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.1□□□□□ -1.59
USP48Q86UV5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.1□□□□□ -1.59
USP48Q86UV5 CCDC34P1-201ENST00000507441 517 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AL592156.1-201ENST00000508758 304 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RNU6-677P-201ENST00000516914 101 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 RN7SKP258-201ENST00000517151 304 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.1□□□□□ -1.59
USP48Q86UV5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.1□□□□□ -1.59
USP48Q86UV5 AC026464.5-201ENST00000562497 722 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AL670379.4-201ENST00000605279 254 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AC007619.2-201ENST00000605743 379 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 SNORA51-201ENST00000606420 132 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 AC104237.2-201ENST00000612456 443 ntBASIC5.1□□□□□ -1.59
USP48Q86UV5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
USP48Q86UV5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.1□□□□□ -1.59
USP48Q86UV5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP48Q86UV5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
USP48Q86UV5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP48Q86UV5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP48Q86UV5 Y_RNA.184-201ENST00000363884 108 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 RNU6-173P-201ENST00000364215 104 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 MIR1911-201ENST00000410783 80 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 MTCO1P39-201ENST00000426148 480 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 RPL26P6-201ENST00000440913 438 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 ABCF2P2-201ENST00000450549 296 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 KLHL2P1-201ENST00000508691 521 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 RN7SKP13-201ENST00000515933 244 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 Y_RNA.691-201ENST00000516611 103 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 SNORA31.20-201ENST00000517111 133 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AP005597.4-201ENST00000526762 229 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.09□□□□□ -1.59
USP48Q86UV5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.09□□□□□ -1.59
USP48Q86UV5 SNRPGP15-201ENST00000600149 222 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 BDH2P1-201ENST00000602288 736 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AL360085.1-201ENST00000604713 532 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AL158032.1-201ENST00000605401 106 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AL359547.2-201ENST00000615810 418 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.09□□□□□ -1.59
USP48Q86UV5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.09□□□□□ -1.59
USP48Q86UV5 AC011266.1-201ENST00000624119 3569 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 NOL8P1-201ENST00000508336 3529 ntBASIC5.09□□□□□ -1.59
USP48Q86UV5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP48Q86UV5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.09□□□□□ -1.59
USP48Q86UV5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP48Q86UV5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
USP48Q86UV5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP48Q86UV5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP48Q86UV5 AP001350.1-201ENST00000601906 1524 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.08□□□□□ -1.6
USP48Q86UV5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.08□□□□□ -1.6
USP48Q86UV5 AC121333.1-201ENST00000567488 2709 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP48Q86UV5 RNA5SP119-201ENST00000362715 117 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 Y_RNA.414-201ENST00000384011 101 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms