Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RPS4XP3-201ENST00000398541 413 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC074117.2-201ENST00000417130 397 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.74□□□□□ -2.13
USP54Q70EL1 AP003033.1-201ENST00000527244 415 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC092470.1-201ENST00000546187 132 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.74□□□□□ -2.13
USP54Q70EL1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 AP001330.4-201ENST00000604350 154 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 AC008121.3-201ENST00000618726 433 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 MIR6788-201ENST00000618842 66 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USP54Q70EL1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 RNA5SP252-201ENST00000391131 119 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.74□□□□□ -2.13
USP54Q70EL1 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 TATDN1P1-201ENST00000414123 891 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.74□□□□□ -2.13
USP54Q70EL1 RPL12P25-201ENST00000455592 494 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC092902.1-201ENST00000486999 259 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC093801.2-201ENST00000503966 1050 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.74□□□□□ -2.13
USP54Q70EL1 C1DP5-201ENST00000525775 383 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.74□□□□□ -2.13
USP54Q70EL1 AC125611.2-201ENST00000551907 647 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 AL138976.2-201ENST00000563989 694 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.74□□□□□ -2.13
USP54Q70EL1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
USP54Q70EL1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.73□□□□□ -2.13
USP54Q70EL1 AP000560.1-201ENST00000624150 1937 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 RNU6-1032P-201ENST00000384100 107 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AC099677.1-201ENST00000420575 175 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.73□□□□□ -2.13
USP54Q70EL1 RPL35AP22-201ENST00000436855 335 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.73□□□□□ -2.13
USP54Q70EL1 AL136380.1-201ENST00000447970 162 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 FO393415.2-201ENST00000480085 343 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 RNU1-104P-201ENST00000517280 175 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AC135279.1-201ENST00000543493 504 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.73□□□□□ -2.13
USP54Q70EL1 AC090897.2-201ENST00000581715 130 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 AC083806.3-201ENST00000614016 455 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.73□□□□□ -2.13
USP54Q70EL1 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
USP54Q70EL1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
USP54Q70EL1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
USP54Q70EL1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USP54Q70EL1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USP54Q70EL1 Z75741.2-201ENST00000417272 1167 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 MTND5P25-201ENST00000430499 799 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 IPO7P1-201ENST00000442031 636 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 OR6K5P-201ENST00000447050 945 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 MTND3P24-201ENST00000506306 329 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.72□□□□□ -2.13
USP54Q70EL1 AC109446.2-201ENST00000567872 497 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 AC106900.2-201ENST00000604994 317 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 AC135178.6-201ENST00000605314 398 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 AL356118.1-201ENST00000635272 1078 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 CDC27P3-201ENST00000635418 1910 ntBASIC1.72□□□□□ -2.13
USP54Q70EL1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
USP54Q70EL1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP54Q70EL1 RNA5SP258-201ENST00000362750 119 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
USP54Q70EL1 RNA5SP56-201ENST00000410277 118 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 RNU6-193P-201ENST00000410977 107 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 RPL7P29-201ENST00000437151 728 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.71□□□□□ -2.14
USP54Q70EL1 CDC42P4-201ENST00000510507 563 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AC084364.2-201ENST00000546924 395 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 SUMO2P14-201ENST00000604488 293 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AC138473.1-201ENST00000605717 526 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AC068880.5-201ENST00000624331 290 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 RNU6-173P-201ENST00000364215 104 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.71□□□□□ -2.14
USP54Q70EL1 UBE2FP3-201ENST00000436366 524 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 RPL7P18-201ENST00000478965 734 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.71□□□□□ -2.14
USP54Q70EL1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.71□□□□□ -2.14
USP54Q70EL1 PRELID3BP4-201ENST00000515476 571 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.71□□□□□ -2.14
USP54Q70EL1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP54Q70EL1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP54Q70EL1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.71□□□□□ -2.14
USP54Q70EL1 HSPE1P7-201ENST00000604681 321 ntBASIC1.71□□□□□ -2.14
USP54Q70EL1 MTND4P8-201ENST00000514997 1362 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 Z82195.2-201ENST00000612348 18351 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 RNU6-670P-201ENST00000364312 104 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 MIR548J-201ENST00000408833 112 ntBASIC1.7□□□□□ -2.14
USP54Q70EL1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.7□□□□□ -2.14
USP54Q70EL1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.7□□□□□ -2.14
USP54Q70EL1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.7□□□□□ -2.14
USP54Q70EL1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms