Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNA5SP468-201ENST00000516782 93 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AP005597.4-201ENST00000526762 229 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC005498.1-201ENST00000592125 465 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AL355816.1-201ENST00000607951 118 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 MIR203B-201ENST00000636080 86 ntBASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CSPG4Q6UVK1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNU6-203P-201ENST00000384038 104 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNA5SP233-201ENST00000459153 113 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC097493.1-201ENST00000463958 372 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC022493.1-201ENST00000492984 337 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 MTCO2P32-201ENST00000514865 403 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AP003072.4-201ENST00000624580 310 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNU4-7P-201ENST00000364758 141 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 MIR524-201ENST00000385242 87 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNA5SP105-201ENST00000391123 113 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AL512661.1-201ENST00000434586 1253 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC234064.1-201ENST00000436312 247 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AL121601.2-201ENST00000438019 707 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 HMGN2P16-201ENST00000456802 261 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC114322.1-201ENST00000506771 926 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNU1-61P-201ENST00000516107 151 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 RNU11-2P-201ENST00000516898 142 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC108706.1-201ENST00000611053 297 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 MTND4P12-201ENST00000498999 1377 ntBASIC0.92□□□□□ -2.26
CSPG4Q6UVK1 AL137003.2-201ENST00000606924 2538 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AP000648.3-201ENST00000623539 4507 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 RNU6-115P-201ENST00000364310 107 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 RNU1-52P-201ENST00000384190 164 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 HNRNPDP2-201ENST00000406475 478 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 MIR1197-201ENST00000408818 88 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AC013268.2-201ENST00000420753 337 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 ZNF965P-201ENST00000432501 817 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AP000949.1-201ENST00000438328 629 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AC004022.1-201ENST00000447766 1066 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 MTCO3P35-201ENST00000485582 781 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AC105252.1-201ENST00000503089 286 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 LRRC34P2-201ENST00000514850 553 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 OSBPL9P3-201ENST00000534523 595 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AC245128.3-201ENST00000594721 748 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AL390240.1-201ENST00000612950 384 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 ZNF519P1-201ENST00000449011 1626 ntBASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.91□□□□□ -2.26
CSPG4Q6UVK1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 MIR627-201ENST00000384979 97 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 RNU11-5P-201ENST00000391216 129 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AL627224.1-201ENST00000448334 444 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AC023790.1-201ENST00000482174 347 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 NBEAP1-201ENST00000554452 979 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 DUXAP11-201ENST00000603858 526 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AL713998.2-201ENST00000604538 1198 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AC007275.1-201ENST00000621243 671 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 AC116563.2-201ENST00000624751 535 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 MFSD8-213ENST00000641134 1327 ntBASIC0.9□□□□□ -2.26
CSPG4Q6UVK1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 UBE2FP3-201ENST00000436366 524 ntBASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 AC090096.1-201ENST00000489168 390 ntBASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 RNU4-60P-201ENST00000517239 135 ntBASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.9□□□□□ -2.27
CSPG4Q6UVK1 AC123912.3-201ENST00000600907 1367 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 RNU6-234P-201ENST00000365229 104 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 RNU6-1077P-201ENST00000410506 102 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC074117.2-201ENST00000417130 397 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC010285.1-201ENST00000470580 392 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms