Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 SNORA59A-201ENST00000459326 152 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC092757.1-201ENST00000467293 467 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC069528.1-202ENST00000482888 637 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 RNU6-798P-201ENST00000516912 103 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 RNU6-1261P-201ENST00000517194 104 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 ARL2BPP5-201ENST00000523141 481 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 SULT1C2P1-202ENST00000562418 459 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC023813.2-201ENST00000564321 469 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC103710.4-201ENST00000609301 899 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC016597.2-201ENST00000613256 341 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC109454.4-201ENST00000623411 649 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 MKKS-204ENST00000639674 192 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 LINC02211-204ENST00000642024 1070 ntBASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCD3Q6STE5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 SNORD116.1-201ENST00000365628 92 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 SNRPEP2-201ENST00000397592 279 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 VN1R51P-201ENST00000411675 945 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MTCO2P8-201ENST00000412213 658 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 NPM1P11-201ENST00000417106 855 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 RPS3AP37-201ENST00000419176 745 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC007560.1-201ENST00000426912 237 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MTCO1P48-201ENST00000448024 1096 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL049714.1-201ENST00000466686 347 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 BOLA3P3-201ENST00000505182 232 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 RNU6-415P-201ENST00000516252 97 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AP001189.2-201ENST00000527320 189 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MTCYBP27-201ENST00000555160 670 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 HMGB1P14-201ENST00000557424 591 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL049838.1-201ENST00000563647 981 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MTCO2P2-201ENST00000591258 225 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC245884.10-201ENST00000597355 337 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC009974.1-201ENST00000608881 455 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC024257.5-201ENST00000612739 531 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AL078595.3-201ENST00000623815 1166 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCD3Q6STE5 AC006020.1-201ENST00000420179 1854 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC106754.1-201ENST00000562632 1513 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 SNRPEP3-201ENST00000338402 276 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 TMSB4XP8-201ENST00000402089 135 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 RNA5SP80-201ENST00000410475 111 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC068533.2-201ENST00000411872 306 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 TMSB4XP6-201ENST00000415187 135 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 MRPS36P1-201ENST00000421291 307 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 TMSB4XP1-201ENST00000424567 135 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC024082.2-201ENST00000434771 238 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC090774.1-201ENST00000435925 246 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 VN1R10P-201ENST00000447106 875 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 RFC5P1-201ENST00000454419 874 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 ANKRD26P4-201ENST00000455755 950 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 AC005410.1-202ENST00000460347 485 ntBASIC1.92□□□□□ -2.1
SMARCD3Q6STE5 HSPE1P6-201ENST00000479457 291 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms