Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC010733.1-201ENST00000451515 401 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AL138752.1-201ENST00000452964 351 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 RPL23AP31-201ENST00000456160 467 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 RPL7AP28-201ENST00000464513 571 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 AC104057.1-201ENST00000515547 497 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 RNU6-1212P-201ENST00000517023 104 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 AC073410.2-201ENST00000603240 332 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AP001282.2-201ENST00000616149 309 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AL159153.1-201ENST00000619688 317 ntBASIC4.95□□□□□ -1.62
RNF43Q68DV7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF43Q68DV7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF43Q68DV7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF43Q68DV7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF43Q68DV7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF43Q68DV7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF43Q68DV7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 Y_RNA.48-201ENST00000362710 103 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RNU6-249P-201ENST00000363016 102 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RNU6-946P-201ENST00000383878 107 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 MIR23B-201ENST00000384832 97 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RNA5SP372-201ENST00000390836 115 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RPS4XP7-201ENST00000406274 780 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RN7SKP159-201ENST00000410657 292 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RNU2-25P-201ENST00000411041 191 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RPL23AP38-201ENST00000423801 469 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC073587.1-201ENST00000447093 876 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 AL133244.1-201ENST00000456007 258 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 RNU7-169P-201ENST00000459456 61 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC087385.1-201ENST00000475062 312 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC098869.1-201ENST00000481627 292 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 HMGN1P28-201ENST00000521340 364 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 VN1R91P-201ENST00000594377 169 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RNF43Q68DV7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC009643.2-201ENST00000603543 1448 ntBASIC4.94□□□□□ -1.62
RNF43Q68DV7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF43Q68DV7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 TLK1P1-201ENST00000456760 2440 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 NEAT1-202ENST00000501122 22743 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC138393.1-203ENST00000327086 343 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 SNORA70F-201ENST00000384142 135 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 RNU6-48P-201ENST00000384161 107 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 RNU6-121P-201ENST00000410525 99 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 RNU2-15P-201ENST00000410692 191 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 RNU6-1203P-201ENST00000410703 110 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 RNA5SP111-201ENST00000411386 101 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 UBE2FP1-201ENST00000416536 447 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 SYF2P2-201ENST00000417620 583 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 RPS3AP46-201ENST00000448352 682 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 FABP5P13-201ENST00000452144 328 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC007967.1-201ENST00000455422 1159 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC135721.1-201ENST00000497954 479 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AP000859.1-201ENST00000525536 307 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC012669.1-201ENST00000603209 283 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms