Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC012507.3-201ENST00000603556 477 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC008277.2-201ENST00000605196 797 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC017083.3-201ENST00000609955 700 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AL138713.1-201ENST00000624026 2130 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 SNORA50A-202ENST00000629536 136 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AP004289.2-201ENST00000444413 1457 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC103988.1-201ENST00000566382 2177 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 MIR208A-201ENST00000362287 71 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 RNA5SP387-201ENST00000364226 106 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 RNU6-867P-201ENST00000364956 107 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 MIR19A-201ENST00000384878 82 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 MIR514A1-201ENST00000385133 98 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AL391417.1-201ENST00000404100 426 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC068533.1-201ENST00000418542 415 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC091286.1-201ENST00000431233 461 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 TIMM9P1-201ENST00000436122 256 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 RNA5SP337-201ENST00000517007 109 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC007991.1-201ENST00000522680 631 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AL512360.1-201ENST00000555346 234 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 KC877982.1-201ENST00000602313 470 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC007363.1-201ENST00000604736 620 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC093838.1-201ENST00000613014 469 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC005344.1-201ENST00000613391 459 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 MIR6075-201ENST00000620782 95 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AC139792.3-201ENST00000623525 224 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 AL034408.1-202ENST00000636088 415 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.22□□□□□ -1.73
LONRF3Q496Y0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LONRF3Q496Y0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LONRF3Q496Y0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LONRF3Q496Y0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
LONRF3Q496Y0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU6-169P-201ENST00000365336 107 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 SNORA36C-201ENST00000384289 132 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RPL7P60-201ENST00000397636 735 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AL109755.1-201ENST00000401791 649 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 HMGB3P20-201ENST00000417997 600 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 ELOCP4-201ENST00000420090 333 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC006946.1-201ENST00000429106 328 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU7-59P-201ENST00000459101 61 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 MTCO2P29-201ENST00000465212 189 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU1-95P-201ENST00000516357 160 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU1-128P-201ENST00000516704 160 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 NRON-201ENST00000517270 370 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AP003034.1-201ENST00000534621 422 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AL157687.1-201ENST00000554853 619 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AL136363.1-201ENST00000605349 337 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 uc_338.12-201ENST00000616344 181 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 AC092628.2-201ENST00000622492 339 ntBASIC4.21□□□□□ -1.74
LONRF3Q496Y0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LONRF3Q496Y0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 MAPK10-362ENST00000641864 4484 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms