Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AL121576.1-201ENST00000556055 276 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 TRAV28-201ENST00000557548 323 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 MIR5685-201ENST00000579080 79 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 MIR6075-201ENST00000620782 95 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 MIR3662-201ENST00000637030 95 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 AC008725.1-201ENST00000605123 2263 ntBASIC4.69□□□□□ -1.66
CCDC144BQ3MJ40 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 CUL1P1-201ENST00000509510 2425 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RPL7P26-201ENST00000333817 754 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-451P-201ENST00000362921 107 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 FGF7P8-201ENST00000402994 292 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AL606923.1-201ENST00000406616 190 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 U3.42-201ENST00000408746 214 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-193P-201ENST00000410977 107 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RAC1P3-201ENST00000416129 580 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 YPEL5P1-201ENST00000419731 367 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AL118520.1-201ENST00000450770 291 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RBBP4P6-201ENST00000508098 202 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RNU4-29P-201ENST00000515943 174 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-358P-201ENST00000516564 75 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 HIF1AP1-201ENST00000553642 175 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 AC098826.3-201ENST00000603823 466 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 HMGB1P50-201ENST00000605814 607 ntBASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC144BQ3MJ40 FAM35DP-201ENST00000323387 2712 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RIOK3P1-201ENST00000418778 1528 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 SNORA71.3-201ENST00000362582 128 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 Y_RNA.245-201ENST00000364493 95 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 MIR301A-201ENST00000385261 86 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-550P-201ENST00000391057 101 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RNA5SP44-201ENST00000410446 133 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-1068P-201ENST00000410958 103 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 HSPE1P12-201ENST00000412576 301 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AL139413.1-201ENST00000421309 217 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AL691449.1-201ENST00000426570 421 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC007919.1-201ENST00000429380 217 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC018644.1-201ENST00000429934 551 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 GOT2P5-201ENST00000433995 546 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 Z82210.1-201ENST00000440037 231 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 ELOCP23-201ENST00000452014 332 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RPS29P25-201ENST00000481709 171 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RPL31P61-201ENST00000496160 376 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-1282P-201ENST00000516735 96 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 RNA5SP290-201ENST00000517133 127 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC118273.2-201ENST00000532092 465 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC120057.2-201ENST00000571520 271 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC015917.1-201ENST00000579654 510 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AC024220.1-201ENST00000603675 484 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AL161798.1-201ENST00000604630 131 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 CR392039.5-201ENST00000623201 510 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AF117829.1-206ENST00000621883 3802 ntBASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC144BQ3MJ40 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC022336.2-201ENST00000568966 2538 ntBASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144BQ3MJ40 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms