Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AP002782.1-201ENST00000623107 614 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC079597.1-201ENST00000624306 508 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC099063.3-201ENST00000642066 185 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFX4Q33E94 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RFX4Q33E94 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX4Q33E94 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX4Q33E94 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFX4Q33E94 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFX4Q33E94 RNU6-1200P-201ENST00000384162 107 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 MTCO1P17-201ENST00000411522 491 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC080125.1-201ENST00000414888 684 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.36□□□□□ -2.03
RFX4Q33E94 USP9YP20-201ENST00000419224 558 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 TAAR7P-201ENST00000436141 242 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AL135938.1-201ENST00000443141 297 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 RPL23AP35-201ENST00000451906 501 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 RPL23AP70-201ENST00000483361 460 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC011825.1-201ENST00000484967 388 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC104685.1-201ENST00000502445 371 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 RNA5SP216-201ENST00000516111 123 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 SNORA31.21-201ENST00000517180 77 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
RFX4Q33E94 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 VN1R92P-201ENST00000598511 928 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC234772.3-201ENST00000602277 528 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 AC021171.1-201ENST00000603137 706 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 RNU6-88P-201ENST00000606801 100 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 AC079395.3-201ENST00000615161 484 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 AC023510.2-201ENST00000622162 746 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.36□□□□□ -2.03
RFX4Q33E94 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.36□□□□□ -2.03
RFX4Q33E94 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX4Q33E94 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC005832.2-201ENST00000538921 1430 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 MTND5P33-201ENST00000571250 1450 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC009902.3-201ENST00000606235 2172 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX4Q33E94 RNU6-1214P-201ENST00000363650 109 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 RNU6-270P-201ENST00000364131 105 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 RNA5SP88-201ENST00000365560 109 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 MIR9-1-201ENST00000385198 89 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 U3.20-201ENST00000390909 217 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 TPMTP3-201ENST00000411928 735 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AL022400.1-201ENST00000423946 935 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.35□□□□□ -2.03
RFX4Q33E94 MTND1P20-201ENST00000430341 950 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 RPL23AP83-201ENST00000434984 473 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 RPS24P13-201ENST00000442520 397 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AL606662.1-201ENST00000445763 553 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 TPT1P14-201ENST00000448018 505 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC133134.1-201ENST00000466800 359 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 LARP1BP2-201ENST00000486594 519 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC135721.1-201ENST00000497954 479 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC008716.1-201ENST00000511084 513 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 OR5BM1P-201ENST00000512021 366 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX4Q33E94 RNU6-1256P-201ENST00000516539 103 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC087276.1-201ENST00000529659 480 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC079600.2-201ENST00000550076 130 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC060771.1-201ENST00000582031 164 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 MIR544B-201ENST00000582372 78 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 MIR4999-201ENST00000585029 91 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AL645944.1-201ENST00000603857 493 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC105148.1-201ENST00000604961 409 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC018714.1-201ENST00000605028 208 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFX4Q33E94 AC072039.2-201ENST00000608883 439 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC245517.5-201ENST00000611529 162 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC034102.8-201ENST00000615146 484 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AL161629.2-201ENST00000615347 275 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 AC012150.2-201ENST00000621300 544 ntBASIC2.35□□□□□ -2.03
RFX4Q33E94 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFX4Q33E94 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RFX4Q33E94 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RFX4Q33E94 SNORA23-201ENST00000365128 182 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms