Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 MIR613-201ENST00000385248 95 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF1Q10570 MTCO3P4-201ENST00000419236 787 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF1Q10570 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 MTCYBP12-201ENST00000440559 1134 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF1Q10570 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF1Q10570 snoU13.3-201ENST00000459441 104 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 AC108120.2-201ENST00000512973 294 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF1Q10570 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF1Q10570 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF1Q10570 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.65□□□□□ -2.14
CPSF1Q10570 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CPSF1Q10570 CIR1P3-201ENST00000405137 479 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 RPL7P30-201ENST00000420888 709 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 AL356867.1-201ENST00000429623 299 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 AC092155.2-201ENST00000454675 477 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 AC096745.1-201ENST00000509945 370 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 RNU6-1004P-201ENST00000516584 111 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 AC087272.1-201ENST00000523624 533 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF1Q10570 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF1Q10570 AGGF1P5-201ENST00000567900 919 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 AC097504.2-201ENST00000608088 454 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
CPSF1Q10570 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF1Q10570 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF1Q10570 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF1Q10570 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF1Q10570 MTND1P18-201ENST00000448191 573 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 PMCHL2-203ENST00000457791 237 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 RPS15AP17-201ENST00000470598 390 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 SNORA31.8-201ENST00000516327 108 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF1Q10570 AC011604.1-201ENST00000545978 196 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.64□□□□□ -2.15
CPSF1Q10570 AC097468.3-201ENST00000607956 456 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 AL355810.1-201ENST00000614629 552 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF1Q10570 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CPSF1Q10570 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CPSF1Q10570 MTND4P31-201ENST00000425607 1343 ntBASIC1.64□□□□□ -2.15
CPSF1Q10570 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF1Q10570 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.63□□□□□ -2.15
CPSF1Q10570 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CPSF1Q10570 RNY1-201ENST00000364228 113 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 MIR520E-201ENST00000384867 87 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 PTGES3P2-201ENST00000407942 482 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF1Q10570 RNU7-26P-201ENST00000458980 63 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 RPS29P1-201ENST00000465274 159 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 AC016065.2-201ENST00000514530 444 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 RNU6-1308P-201ENST00000516817 103 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.63□□□□□ -2.15
CPSF1Q10570 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF1Q10570 AL137100.2-201ENST00000555786 315 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF1Q10570 AC002487.1-201ENST00000604565 994 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 AL355297.2-201ENST00000604792 129 ntBASIC1.63□□□□□ -2.15
CPSF1Q10570 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.62□□□□□ -2.15
CPSF1Q10570 SGO1P2-201ENST00000429458 1589 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 RNU6-185P-201ENST00000384421 107 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CPSF1Q10570 BUD31P2-201ENST00000449374 300 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.62□□□□□ -2.15
CPSF1Q10570 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.62□□□□□ -2.15
CPSF1Q10570 MIR151B-201ENST00000584249 96 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.62□□□□□ -2.15
CPSF1Q10570 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.62□□□□□ -2.15
CPSF1Q10570 AP001486.3-201ENST00000615334 372 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 AC021755.4-201ENST00000616620 456 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 AC109809.1-201ENST00000619665 545 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 AC068880.5-201ENST00000624331 290 ntBASIC1.62□□□□□ -2.15
CPSF1Q10570 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CPSF1Q10570 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF1Q10570 SRIP3-201ENST00000413200 219 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 MTCO3P12-201ENST00000416718 547 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AC093155.1-201ENST00000440164 826 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AL360221.1-201ENST00000445989 335 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 OR6C72P-201ENST00000451403 892 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 ARL2BPP4-201ENST00000506854 471 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AC006390.1-201ENST00000508068 283 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AP000907.2-201ENST00000530827 353 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF1Q10570 AC024619.4-201ENST00000580924 316 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 MTATP6P3-201ENST00000581686 676 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 AC006338.1-201ENST00000618453 749 ntBASIC1.61□□□□□ -2.15
CPSF1Q10570 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CPSF1Q10570 RNU4-91P-201ENST00000364778 135 ntBASIC1.6□□□□□ -2.15
CPSF1Q10570 MIR222-201ENST00000384992 110 ntBASIC1.6□□□□□ -2.15
CPSF1Q10570 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF1Q10570 AC107398.1-201ENST00000486904 505 ntBASIC1.6□□□□□ -2.15
CPSF1Q10570 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF1Q10570 AL359273.1-201ENST00000510918 627 ntBASIC1.6□□□□□ -2.15
CPSF1Q10570 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms