Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.91□□□□□ -2.26
TFF3Q07654 AP003072.4-201ENST00000624580 310 ntBASIC0.91□□□□□ -2.26
TFF3Q07654 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.91□□□□□ -2.26
TFF3Q07654 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 OR6C66P-201ENST00000414917 930 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.9□□□□□ -2.27
TFF3Q07654 AL606495.1-201ENST00000422100 813 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 XKRYP1-201ENST00000423438 492 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 AC092648.1-201ENST00000425870 423 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 XKRYP2-201ENST00000432915 492 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 AL445687.1-201ENST00000439946 251 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
TFF3Q07654 AL500527.1-201ENST00000448532 255 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 COX6CP18-201ENST00000448769 222 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TFF3Q07654 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.9□□□□□ -2.27
TFF3Q07654 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.9□□□□□ -2.27
TFF3Q07654 OR6C73P-201ENST00000546432 358 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.9□□□□□ -2.27
TFF3Q07654 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.9□□□□□ -2.27
TFF3Q07654 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TFF3Q07654 RNF6P1-201ENST00000444889 1784 ntBASIC0.9□□□□□ -2.27
TFF3Q07654 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TFF3Q07654 MFSD8-213ENST00000641134 1327 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AL161722.3-201ENST00000605789 2983 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 MIR513A1-201ENST00000385138 129 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.89□□□□□ -2.27
TFF3Q07654 AC244098.2-201ENST00000422068 99 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 RPL21P66-201ENST00000426566 466 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.89□□□□□ -2.27
TFF3Q07654 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.89□□□□□ -2.27
TFF3Q07654 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.89□□□□□ -2.27
TFF3Q07654 AC010099.1-201ENST00000455434 375 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 RNU7-26P-201ENST00000458980 63 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AC093767.1-201ENST00000504523 156 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.89□□□□□ -2.27
TFF3Q07654 AC091965.2-201ENST00000512324 613 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 RNU6-928P-201ENST00000516876 104 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.89□□□□□ -2.27
TFF3Q07654 AC084033.1-201ENST00000550830 633 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AL161912.3-201ENST00000605404 628 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AC106052.1-201ENST00000608029 497 ntBASIC0.89□□□□□ -2.27
TFF3Q07654 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.89□□□□□ -2.27
TFF3Q07654 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TFF3Q07654 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TFF3Q07654 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.89□□□□□ -2.27
TFF3Q07654 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AC111188.2-201ENST00000529697 1387 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.88□□□□□ -2.27
TFF3Q07654 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TFF3Q07654 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 SNORD14B-201ENST00000364533 90 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TFF3Q07654 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 RNU1-139P-201ENST00000391307 165 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.88□□□□□ -2.27
TFF3Q07654 AL513475.1-201ENST00000406602 315 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.88□□□□□ -2.27
TFF3Q07654 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.88□□□□□ -2.27
TFF3Q07654 GDI2P2-201ENST00000445131 608 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.88□□□□□ -2.27
TFF3Q07654 AC108059.3-201ENST00000456388 214 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 PMCHL2-203ENST00000457791 237 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.88□□□□□ -2.27
TFF3Q07654 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
TFF3Q07654 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.88□□□□□ -2.27
TFF3Q07654 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.88□□□□□ -2.27
TFF3Q07654 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TFF3Q07654 BTF3P12-201ENST00000519620 469 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.88□□□□□ -2.27
TFF3Q07654 AC123912.5-201ENST00000605470 343 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AL445493.3-201ENST00000619568 477 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 AC132825.8-201ENST00000640783 297 ntBASIC0.88□□□□□ -2.27
TFF3Q07654 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TFF3Q07654 AL137003.2-201ENST00000606924 2538 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC025263.3-201ENST00000622965 1396 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.87□□□□□ -2.27
TFF3Q07654 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TFF3Q07654 CYCSP33-201ENST00000414485 327 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AL161449.1-201ENST00000414531 1199 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC007560.1-201ENST00000426912 237 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.87□□□□□ -2.27
TFF3Q07654 Z80107.1-201ENST00000436830 412 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 snoU109.4-201ENST00000458953 143 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 HMGB1P38-201ENST00000490557 577 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 PCNAP1-201ENST00000505363 709 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC022690.1-201ENST00000526681 550 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.87□□□□□ -2.27
TFF3Q07654 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.87□□□□□ -2.27
TFF3Q07654 AL731537.2-201ENST00000561565 951 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.87□□□□□ -2.27
TFF3Q07654 AC005332.10-201ENST00000612725 619 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AC109454.4-201ENST00000623411 649 ntBASIC0.87□□□□□ -2.27
TFF3Q07654 AP001350.1-201ENST00000601906 1524 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms