Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC093278.1-201ENST00000494700 600 ntBASIC3.41□□□□□ -1.86
LTBQ06643 COX7A2P2-201ENST00000505291 250 ntBASIC3.41□□□□□ -1.86
LTBQ06643 HSPD1P15-201ENST00000505573 1122 ntBASIC3.41□□□□□ -1.86
LTBQ06643 FGF7P4-201ENST00000509595 295 ntBASIC3.41□□□□□ -1.86
LTBQ06643 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.41□□□□□ -1.86
LTBQ06643 AC112206.3-201ENST00000514578 389 ntBASIC3.41□□□□□ -1.86
LTBQ06643 RNU6-410P-201ENST00000517006 107 ntBASIC3.41□□□□□ -1.86
LTBQ06643 IGKV2D-36-201ENST00000518643 226 ntBASIC3.41□□□□□ -1.86
LTBQ06643 SUB1P1-201ENST00000524415 382 ntBASIC3.41□□□□□ -1.86
LTBQ06643 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.41□□□□□ -1.86
LTBQ06643 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LTBQ06643 HPRT1P3-201ENST00000539521 576 ntBASIC3.41□□□□□ -1.86
LTBQ06643 AC243972.3-201ENST00000539655 198 ntBASIC3.41□□□□□ -1.86
LTBQ06643 AC023050.3-201ENST00000541142 333 ntBASIC3.41□□□□□ -1.86
LTBQ06643 CYCSP30-201ENST00000546447 172 ntBASIC3.41□□□□□ -1.86
LTBQ06643 AC125611.2-201ENST00000551907 647 ntBASIC3.41□□□□□ -1.86
LTBQ06643 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.41□□□□□ -1.86
LTBQ06643 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.41□□□□□ -1.86
LTBQ06643 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.41□□□□□ -1.86
LTBQ06643 AL590099.1-201ENST00000615276 138 ntBASIC3.41□□□□□ -1.86
LTBQ06643 AC091925.2-201ENST00000625059 256 ntBASIC3.41□□□□□ -1.86
LTBQ06643 MTND1P37-201ENST00000636562 264 ntBASIC3.41□□□□□ -1.86
LTBQ06643 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LTBQ06643 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
LTBQ06643 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LTBQ06643 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LTBQ06643 HSPA8P1-201ENST00000425843 1833 ntBASIC3.4□□□□□ -1.86
LTBQ06643 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LTBQ06643 AL138713.1-201ENST00000624026 2130 ntBASIC3.4□□□□□ -1.86
LTBQ06643 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
LTBQ06643 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LTBQ06643 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LTBQ06643 XIAPP3-201ENST00000312918 795 ntBASIC3.4□□□□□ -1.87
LTBQ06643 NACAP2-201ENST00000318548 624 ntBASIC3.4□□□□□ -1.87
LTBQ06643 Y_RNA.22-201ENST00000362492 102 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RNVU1-3-201ENST00000364313 161 ntBASIC3.4□□□□□ -1.87
LTBQ06643 Y_RNA.255-201ENST00000364581 97 ntBASIC3.4□□□□□ -1.87
LTBQ06643 MIR124-3-201ENST00000384866 87 ntBASIC3.4□□□□□ -1.87
LTBQ06643 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LTBQ06643 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL136116.1-201ENST00000403591 381 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL162578.1-201ENST00000406202 378 ntBASIC3.4□□□□□ -1.87
LTBQ06643 SNORA3.3-201ENST00000408712 125 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC137499.1-201ENST00000427602 88 ntBASIC3.4□□□□□ -1.87
LTBQ06643 HSPD1P21-201ENST00000436541 245 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.4□□□□□ -1.87
LTBQ06643 AC007677.1-201ENST00000445757 515 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
LTBQ06643 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 SNORD121B-201ENST00000458838 81 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RNU7-63P-201ENST00000459054 62 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL049714.1-201ENST00000466686 347 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RPS27AP1-201ENST00000475545 471 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC078785.3-201ENST00000476607 425 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL163973.1-201ENST00000484753 577 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
LTBQ06643 EIF4EP3-201ENST00000498782 656 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RNU6-27P-201ENST00000516146 107 ntBASIC3.4□□□□□ -1.87
LTBQ06643 Y_RNA.701-201ENST00000516812 110 ntBASIC3.4□□□□□ -1.87
LTBQ06643 RNU4-60P-201ENST00000517239 135 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 AC103843.2-201ENST00000530523 682 ntBASIC3.4□□□□□ -1.87
LTBQ06643 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.4□□□□□ -1.87
LTBQ06643 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.4□□□□□ -1.87
LTBQ06643 AC093027.1-201ENST00000546698 429 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
LTBQ06643 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.4□□□□□ -1.87
LTBQ06643 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.4□□□□□ -1.87
LTBQ06643 AC105224.1-201ENST00000587055 421 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
LTBQ06643 AC007566.2-201ENST00000603642 413 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC013553.2-201ENST00000604244 589 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL121992.2-201ENST00000606262 256 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AL132765.2-201ENST00000610812 351 ntBASIC3.4□□□□□ -1.87
LTBQ06643 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBQ06643 AC006065.5-201ENST00000623427 349 ntBASIC3.4□□□□□ -1.87
LTBQ06643 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LTBQ06643 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LTBQ06643 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LTBQ06643 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.4□□□□□ -1.87
LTBQ06643 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LTBQ06643 AL359893.1-201ENST00000447628 1580 ntBASIC3.39□□□□□ -1.87
LTBQ06643 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 RNU5A-8P-201ENST00000364102 114 ntBASIC3.39□□□□□ -1.87
LTBQ06643 Y_RNA.367-201ENST00000365544 101 ntBASIC3.39□□□□□ -1.87
LTBQ06643 U8.11-201ENST00000384699 133 ntBASIC3.39□□□□□ -1.87
LTBQ06643 U8.12-201ENST00000384701 133 ntBASIC3.39□□□□□ -1.87
LTBQ06643 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 AL122016.1-201ENST00000403365 367 ntBASIC3.39□□□□□ -1.87
LTBQ06643 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBQ06643 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 RPS20P5-201ENST00000434808 360 ntBASIC3.39□□□□□ -1.87
LTBQ06643 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms