Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NOP56P3-201ENST00000549457 385 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.65□□□□□ -2.3
HSPG2P98160 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
HSPG2P98160 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
HSPG2P98160 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.3
HSPG2P98160 GPM6BP3-201ENST00000442797 145 ntBASIC0.65□□□□□ -2.3
HSPG2P98160 OR4V1P-201ENST00000525394 1140 ntBASIC0.65□□□□□ -2.3
HSPG2P98160 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.3
HSPG2P98160 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.65□□□□□ -2.3
HSPG2P98160 AC021755.4-201ENST00000616620 456 ntBASIC0.65□□□□□ -2.3
HSPG2P98160 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.65□□□□□ -2.31
HSPG2P98160 JTBP1-201ENST00000441314 247 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC090096.1-201ENST00000489168 390 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 RNA5SP364-201ENST00000516938 78 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 CBX3P7-201ENST00000532876 502 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 HSPE1P14-201ENST00000605812 302 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC132825.8-201ENST00000640783 297 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
HSPG2P98160 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
HSPG2P98160 FO393413.1-201ENST00000402892 195 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 MTCO1P43-201ENST00000431831 488 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC004854.1-201ENST00000440356 349 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC004022.1-201ENST00000447766 1066 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 RPL30P12-201ENST00000474666 353 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 HSPE1P4-201ENST00000550617 308 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC123786.2-201ENST00000603459 275 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC121761.2-201ENST00000617300 689 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 AC091925.1-201ENST00000623204 462 ntBASIC0.65□□□□□ -2.31
HSPG2P98160 CR382285.2-201ENST00000624662 1495 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 Y_RNA.48-201ENST00000362710 103 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC104472.2-201ENST00000469035 601 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 SNORA31.16-201ENST00000516773 139 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.64□□□□□ -2.31
HSPG2P98160 LLPHP1-201ENST00000603571 367 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.64□□□□□ -2.31
HSPG2P98160 RNU6-799P-201ENST00000363567 107 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC244035.1-201ENST00000430042 390 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.64□□□□□ -2.31
HSPG2P98160 ARL5AP2-201ENST00000444698 533 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AL500527.1-201ENST00000448532 255 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC114786.4-201ENST00000508771 728 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC114797.1-201ENST00000514003 728 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AF279873.1-201ENST00000523393 313 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 OR4R1P-201ENST00000529879 463 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC106028.5-201ENST00000610332 395 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 ZNF37BP-203ENST00000452306 1352 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 RNU2-71P-201ENST00000411395 189 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 NUP35P2-201ENST00000416748 943 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC090953.1-201ENST00000604305 1092 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HSPG2P98160 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HSPG2P98160 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 PGBD4P6-201ENST00000421501 610 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC015922.2-201ENST00000435593 184 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC093281.2-201ENST00000510153 597 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 CYCSP23-201ENST00000519781 313 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC022662.1-201ENST00000580252 331 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.64□□□□□ -2.31
HSPG2P98160 AC007742.2-201ENST00000618226 398 ntBASIC0.64□□□□□ -2.31
HSPG2P98160 DBF4P1-201ENST00000412976 1892 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC008669.1-201ENST00000565823 2178 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.63□□□□□ -2.31
HSPG2P98160 AC019070.1-201ENST00000415008 1024 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 RPL30P4-201ENST00000429309 333 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 SNRPFP2-201ENST00000440710 251 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.63□□□□□ -2.31
HSPG2P98160 MTND3P24-201ENST00000506306 329 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AP003117.1-201ENST00000602771 554 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 MIR144-201ENST00000384886 86 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 SSXP9-201ENST00000417503 292 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HSPG2P98160 RPS27P1-201ENST00000450552 247 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.63□□□□□ -2.31
HSPG2P98160 HMGB3P17-201ENST00000504195 649 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.63□□□□□ -2.31
HSPG2P98160 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.63□□□□□ -2.31
HSPG2P98160 AC090897.2-201ENST00000581715 130 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AP001180.3-201ENST00000582221 145 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC005034.5-201ENST00000604219 466 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC135178.6-201ENST00000605314 398 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC010889.1-201ENST00000566193 2666 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC073055.1-201ENST00000456901 1621 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HSPG2P98160 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.63□□□□□ -2.31
HSPG2P98160 SNORD14B-201ENST00000364533 90 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 ANAPC10P1-201ENST00000395991 556 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AL355497.1-201ENST00000406262 551 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 RPS29P23-201ENST00000458635 123 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 RNA5SP233-201ENST00000459153 113 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.63□□□□□ -2.31
HSPG2P98160 RNA5SP471-201ENST00000516971 106 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.63□□□□□ -2.31
HSPG2P98160 AC083923.1-201ENST00000523708 376 ntBASIC0.63□□□□□ -2.31
HSPG2P98160 SNORD84-203ENST00000584275 78 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms