Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC104164.2-201ENST00000496953 495 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 RNA5SP471-201ENST00000516971 106 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 RNU6-1314P-201ENST00000517139 104 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX6-1P78426 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX6-1P78426 PSMA3P-201ENST00000555485 635 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC079587.1-201ENST00000603846 277 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC013553.2-201ENST00000604244 589 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AL161798.1-201ENST00000604630 131 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC009994.1-201ENST00000606889 253 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC092807.2-201ENST00000609367 243 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 Z82243.1-201ENST00000609432 473 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX6-1P78426 AC091905.2-201ENST00000623143 306 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 AC112484.5-201ENST00000624189 228 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 MTND1P37-201ENST00000636562 264 ntBASIC3.82□□□□□ -1.8
NKX6-1P78426 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NKX6-1P78426 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX6-1P78426 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX6-1P78426 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX6-1P78426 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX6-1P78426 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 AC007685.1-201ENST00000329806 452 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 RNA5SP502-201ENST00000362694 119 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
NKX6-1P78426 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
NKX6-1P78426 RNU1-63P-201ENST00000383902 164 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 Y_RNA.534-201ENST00000384599 112 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX6-1P78426 RNU2-33P-201ENST00000410344 192 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX6-1P78426 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.81□□□□□ -1.8
NKX6-1P78426 GPM6BP2-201ENST00000432046 144 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 PIGFP3-201ENST00000441918 722 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AC093019.1-201ENST00000443135 252 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 GPM6BP1-201ENST00000446387 144 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 RPS15AP27-201ENST00000449183 343 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX6-1P78426 RPS23P3-201ENST00000470993 430 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AC108475.1-201ENST00000507880 950 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 RNU6-1038P-201ENST00000516516 104 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 BTF3P12-201ENST00000519620 469 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AC087241.2-201ENST00000535801 324 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX6-1P78426 MIR5583-1-201ENST00000580941 59 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 MIR3941-201ENST00000582572 103 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 RPL7P50-201ENST00000600588 727 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AC025946.2-201ENST00000603398 234 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 LARP7P1-201ENST00000605576 316 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 AL136221.1-201ENST00000621449 509 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 Z99571.1-201ENST00000636677 394 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX6-1P78426 AC007785.2-201ENST00000598627 1916 ntBASIC3.81□□□□□ -1.8
NKX6-1P78426 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX6-1P78426 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 MTND4P35-201ENST00000604257 1375 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX6-1P78426 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX6-1P78426 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NKX6-1P78426 RNU1-132P-201ENST00000364300 164 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 RNU6-715P-201ENST00000365204 103 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX6-1P78426 Y_RNA.530-201ENST00000384587 101 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.8□□□□□ -1.8
NKX6-1P78426 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX6-1P78426 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX6-1P78426 MTND1P11-201ENST00000456661 876 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 RN7SL542P-201ENST00000467147 294 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 RPL7P5-201ENST00000471472 736 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 TTC39CP1-201ENST00000512513 755 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX6-1P78426 Y_RNA.665-201ENST00000516177 98 ntBASIC3.8□□□□□ -1.8
NKX6-1P78426 RNA5SP309-201ENST00000516670 106 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms