Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 U3.40-201ENST00000408706 208 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 AC096751.1-202ENST00000502691 1067 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 GLYCAM1-201ENST00000546596 285 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.3□□□□□ -2.2
ABCA4P78363 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 AC090616.3-201ENST00000582184 217 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 RMST_6.1-201ENST00000611980 203 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 AC090116.1-201ENST00000615679 446 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 OR4G11P-202ENST00000642116 1414 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA4P78363 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 MIR548J-201ENST00000408833 112 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 HMGN1P33-201ENST00000432945 451 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 GPM6BP3-201ENST00000442797 145 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 OSTCP8-201ENST00000445117 448 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC114322.1-201ENST00000506771 926 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 RNU6-491P-201ENST00000516099 110 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 AC008015.1-201ENST00000555505 465 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 XIAPP1-201ENST00000603162 600 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC110792.4-201ENST00000609843 298 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 CENPCP1-201ENST00000533085 2578 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 Y_RNA.251-201ENST00000364551 99 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 SNORA67.1-201ENST00000364749 141 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 RPL23AP29-201ENST00000397284 453 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 MORF4L1P7-201ENST00000426038 703 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 RPL7L1P10-201ENST00000427790 463 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 UBE2V1P13-201ENST00000436983 439 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 IPO7P1-201ENST00000442031 636 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 RPS15AP27-201ENST00000449183 343 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 IGKV2D-36-201ENST00000518643 226 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA4P78363 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 AL133216.2-202ENST00000634512 349 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 MKKS-204ENST00000639674 192 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 NUP58P1-201ENST00000502546 1738 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA4P78363 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA4P78363 AC080100.1-201ENST00000624239 5356 ntBASIC1.29□□□□□ -2.2
ABCA4P78363 AC008568.2-201ENST00000623862 2313 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 TPTE2P4-201ENST00000258589 1605 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
ABCA4P78363 RPL27AP8-201ENST00000424277 446 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC007560.1-201ENST00000426912 237 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 EIF4EP3-201ENST00000498782 656 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AP005902.1-201ENST00000521358 186 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 SUB1P1-201ENST00000524415 382 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA4P78363 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 AC023813.2-201ENST00000564321 469 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC025588.3-201ENST00000604182 274 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 OR5H6-203ENST00000642105 978 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ABCA4P78363 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
ABCA4P78363 AC123912.3-201ENST00000600907 1367 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 Y_RNA.30-201ENST00000362572 97 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 RNU5D-1-201ENST00000363299 116 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 SSXP10-201ENST00000402595 565 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA4P78363 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 FO393419.3-201ENST00000428741 282 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
ABCA4P78363 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 RPS20P24-201ENST00000457473 361 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA4P78363 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ABCA4P78363 RNA5SP471-201ENST00000516971 106 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 OR5AQ1P-201ENST00000527596 927 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 OR4R1P-201ENST00000529879 463 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 AC109446.2-201ENST00000567872 497 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC009127.3-201ENST00000570531 403 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA4P78363 AC012493.3-201ENST00000604494 112 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AP000254.1-201ENST00000609934 520 ntBASIC1.28□□□□□ -2.2
ABCA4P78363 AC004852.3-201ENST00000614131 326 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms