Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MAPK10-372ENST00000641954 3413 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 Y_RNA.142-201ENST00000363491 102 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU4-48P-201ENST00000365559 182 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 SNORA32.2-201ENST00000384049 122 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU6-637P-201ENST00000384050 107 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU6-767P-201ENST00000384132 107 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU6-606P-201ENST00000384721 111 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SEC61A1P61619 SNORD37.1-201ENST00000390968 65 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 UBE2V1P2-201ENST00000397758 440 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AL162578.1-201ENST00000406202 378 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 BEND7P1-201ENST00000422058 457 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL445584.1-201ENST00000431451 330 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 MTND4LP16-201ENST00000440828 295 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC073415.1-201ENST00000449240 153 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC234775.1-201ENST00000454247 670 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL163973.1-201ENST00000484753 577 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 RNU7-51P-201ENST00000516560 62 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 RN7SKP209-201ENST00000516888 304 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 OR5AL2P-201ENST00000532185 920 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC023050.3-201ENST00000541142 333 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC091516.1-201ENST00000549191 703 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A1P61619 MIR3186-201ENST00000577404 85 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 MIR4293-201ENST00000584305 78 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AC018638.8-201ENST00000588755 281 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A1P61619 AL450472.3-201ENST00000615578 367 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 FP236240.3-201ENST00000623061 327 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 AC090337.1-201ENST00000579651 2074 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 EXOC5P1-201ENST00000510543 1969 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A1P61619 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC007685.1-201ENST00000329806 452 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SEC61A1P61619 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A1P61619 RNU4-73P-201ENST00000363164 141 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 Y_RNA.263-201ENST00000364659 114 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A1P61619 MIR554-201ENST00000384874 96 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 RNU6-882P-201ENST00000391025 103 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AL136372.1-201ENST00000403060 228 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC114491.1-201ENST00000416095 246 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AL353678.1-201ENST00000422735 741 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
SEC61A1P61619 DDX3P2-201ENST00000446138 111 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 MTND1P9-201ENST00000453775 944 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AL356010.1-201ENST00000456364 102 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 SNORA84-201ENST00000459229 133 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AC116562.3-201ENST00000506136 177 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 SNORD27.1-201ENST00000516319 72 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 RNU2-10P-201ENST00000516375 211 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 BTF3P12-201ENST00000519620 469 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC068587.5-201ENST00000528506 175 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AC243972.3-201ENST00000539655 198 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 YPEL5P3-201ENST00000547227 352 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms