Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLRN1P58418 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
CLRN1P58418 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.83□□□□□ -1.8
CLRN1P58418 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 RNU6-562P-201ENST00000362731 107 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 Y_RNA.146-201ENST00000363549 102 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RNU6-371P-201ENST00000364283 108 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 Y_RNA.482-201ENST00000384377 111 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 SNORD66.1-201ENST00000391230 76 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 SNORA11F-201ENST00000408237 128 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 RPL37P18-201ENST00000411602 243 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 Z82205.1-201ENST00000428456 297 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 SNAP23P1-201ENST00000433229 246 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 AF228730.2-201ENST00000438784 848 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RPL21P41-201ENST00000459863 264 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RPS29P22-201ENST00000472363 168 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.83□□□□□ -1.8
CLRN1P58418 AC093303.1-201ENST00000514549 295 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RNU6-927P-201ENST00000516199 100 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RNU6-1332P-201ENST00000516666 104 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 RANP9-201ENST00000519957 271 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.83□□□□□ -1.8
CLRN1P58418 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.83□□□□□ -1.8
CLRN1P58418 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.83□□□□□ -1.8
CLRN1P58418 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.83□□□□□ -1.8
CLRN1P58418 AC034102.8-201ENST00000615146 484 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 MIR7154-201ENST00000620673 73 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 MIR7703-201ENST00000620784 77 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.83□□□□□ -1.8
CLRN1P58418 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.83□□□□□ -1.8
CLRN1P58418 OR4G2P-202ENST00000641004 1759 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.83□□□□□ -1.8
CLRN1P58418 AL133243.3-201ENST00000617415 3004 ntBASIC3.83□□□□□ -1.8
CLRN1P58418 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN1P58418 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLRN1P58418 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLRN1P58418 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.82□□□□□ -1.8
CLRN1P58418 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.82□□□□□ -1.8
CLRN1P58418 ZNF285B-201ENST00000561698 1767 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 RNU1-108P-201ENST00000362556 161 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RNU6-1188P-201ENST00000363795 107 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 Y_RNA.187-201ENST00000363918 113 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLRN1P58418 Y_RNA.445-201ENST00000384168 102 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RNU6-601P-201ENST00000384540 107 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AL513331.1-201ENST00000411908 397 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RPL21P90-201ENST00000415692 466 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.82□□□□□ -1.8
CLRN1P58418 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.82□□□□□ -1.8
CLRN1P58418 AL451062.2-201ENST00000427515 271 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RPL23AP69-201ENST00000431134 458 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 HSFY6P-201ENST00000445573 403 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC008264.1-201ENST00000447612 367 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.82□□□□□ -1.8
CLRN1P58418 snoU13.1-201ENST00000459157 104 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RPL37P6-201ENST00000460682 294 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 RN7SL98P-201ENST00000462271 300 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.82□□□□□ -1.8
CLRN1P58418 AC092451.1-201ENST00000480211 153 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.82□□□□□ -1.8
CLRN1P58418 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.82□□□□□ -1.8
CLRN1P58418 AC006064.5-201ENST00000541782 248 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.82□□□□□ -1.8
CLRN1P58418 AC022968.1-201ENST00000567372 442 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 MIR5690-201ENST00000583739 73 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 MIR4715-201ENST00000584117 79 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AL354984.3-201ENST00000604803 325 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 AC244517.12-201ENST00000623581 663 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLRN1P58418 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLRN1P58418 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLRN1P58418 SDAD1P2-201ENST00000441308 2028 ntBASIC3.82□□□□□ -1.8
CLRN1P58418 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CLRN1P58418 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 UBE2L2-201ENST00000254302 429 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 RNA5SP447-201ENST00000363749 119 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms