Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNY4P37-201ENST00000516225 96 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 RNU6-390P-201ENST00000516259 103 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN18P56856 AL512347.1-201ENST00000566420 503 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 MTND4LP25-201ENST00000570218 163 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AF038458.1-201ENST00000588406 262 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC136601.2-201ENST00000604356 474 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC112220.2-201ENST00000605513 533 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC104237.2-201ENST00000612456 443 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC005332.10-201ENST00000612725 619 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 SDR42E1P2-201ENST00000614861 481 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AL449363.1-201ENST00000617815 186 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 CTSLP2-204ENST00000629029 392 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 AC080128.1-201ENST00000474389 1917 ntBASIC2.24□□□□□ -2.05
CLDN18P56856 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLDN18P56856 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN18P56856 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN18P56856 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RNU6-343P-201ENST00000364709 104 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RNU6-432P-201ENST00000384196 109 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 MIR592-201ENST00000384959 97 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 SNORA11.2-201ENST00000408318 127 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN18P56856 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN18P56856 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN18P56856 OSTCP8-201ENST00000445117 448 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 COX6CP12-201ENST00000446748 202 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 ST13P20-201ENST00000447996 1065 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN18P56856 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN18P56856 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 AC104563.1-201ENST00000476147 376 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AL160314.1-201ENST00000490836 438 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 SUMO2P5-201ENST00000506790 245 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC023141.11-201ENST00000508864 202 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 TBCAP3-201ENST00000512475 312 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN18P56856 RNU5F-8P-201ENST00000515941 111 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 RNA5SP290-201ENST00000517133 127 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 BTF3P12-201ENST00000519620 469 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC005832.3-201ENST00000537929 631 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC092451.2-201ENST00000538746 658 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN18P56856 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN18P56856 AL357094.1-201ENST00000603845 844 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 BX664608.1-201ENST00000610519 487 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 AC104985.3-201ENST00000623479 597 ntBASIC2.23□□□□□ -2.05
CLDN18P56856 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN18P56856 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN18P56856 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 MIR524-201ENST00000385242 87 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 RNU6-750P-201ENST00000390946 107 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN18P56856 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN18P56856 UBE2FP1-201ENST00000416536 447 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 Z75741.2-201ENST00000417272 1167 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 USP9YP13-201ENST00000417797 480 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AL451054.2-201ENST00000420896 202 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN18P56856 FCF1P1-201ENST00000432690 571 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN18P56856 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 AC107626.1-201ENST00000471084 183 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 RPL23AP45-201ENST00000476406 468 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN18P56856 AC135721.1-201ENST00000497954 479 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AC113347.3-201ENST00000509113 148 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AL512310.1-201ENST00000548639 172 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN18P56856 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN18P56856 AP000403.1-201ENST00000603349 851 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AC021749.1-201ENST00000604322 607 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AC093673.2-201ENST00000609674 331 ntBASIC2.22□□□□□ -2.05
CLDN18P56856 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN18P56856 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN18P56856 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN18P56856 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.21□□□□□ -2.06
CLDN18P56856 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms