Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL356292.1-201ENST00000283110 373 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 SNORA25.6-201ENST00000364121 118 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 SNORA68.1-201ENST00000364537 132 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN6P56747 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLDN6P56747 GSTA9P-201ENST00000406231 611 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN6P56747 Z98742.2-201ENST00000431564 187 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 AL445687.1-201ENST00000439946 251 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN6P56747 RPL36AP51-201ENST00000487216 318 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 EIF4EP3-201ENST00000498782 656 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 MTND4P2-201ENST00000507767 1203 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN6P56747 MTND5P4-201ENST00000514978 288 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 RNU6-583P-201ENST00000516012 92 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 RNU6-1028P-201ENST00000517164 93 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLDN6P56747 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN6P56747 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN6P56747 AC005951.2-201ENST00000576282 495 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 MIR5092-201ENST00000583139 88 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 AL160237.3-201ENST00000604114 1013 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 AP002802.2-201ENST00000605877 235 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 AL512427.1-201ENST00000618593 349 ntBASIC2.26□□□□□ -2.05
CLDN6P56747 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN6P56747 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN6P56747 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN6P56747 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 RNU6-217P-201ENST00000384164 104 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN6P56747 TPMTP2-201ENST00000414372 726 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 USP9YP21-201ENST00000420603 432 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 AC092047.1-201ENST00000424997 240 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 PIGFP3-201ENST00000441918 722 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN6P56747 ARPC3P5-201ENST00000448802 534 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.25□□□□□ -2.05
CLDN6P56747 BX322784.1-201ENST00000455793 1077 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AC114786.4-201ENST00000508771 728 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 XKRY-201ENST00000510392 1100 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 AC114797.1-201ENST00000514003 728 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN6P56747 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 RNA5SP291-201ENST00000517222 105 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN6P56747 AC025281.1-201ENST00000567026 265 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN6P56747 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 AP003485.1-201ENST00000625093 753 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 MIR1291-201ENST00000627649 87 ntBASIC2.25□□□□□ -2.05
CLDN6P56747 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN6P56747 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN6P56747 MIR6073-201ENST00000352083 89 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 Y_RNA.164-201ENST00000363709 102 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 RNA5SP456-201ENST00000364002 114 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 RNA5SP181-201ENST00000410246 98 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 MTND4P3-201ENST00000417829 541 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 ZNF863P-201ENST00000426746 417 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CLDN6P56747 AC027673.1-201ENST00000456245 405 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 RNU7-136P-201ENST00000458819 69 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 SNORD121B-201ENST00000458838 81 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC133134.1-201ENST00000466800 359 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC068587.2-201ENST00000478386 781 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC069528.1-202ENST00000482888 637 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC090096.1-201ENST00000489168 390 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC022447.3-201ENST00000506865 495 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN6P56747 RNA5SP458-201ENST00000516188 119 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 RNU6-714P-201ENST00000516963 103 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC022634.1-201ENST00000520765 532 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN6P56747 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN6P56747 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN6P56747 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.24□□□□□ -2.05
CLDN6P56747 BBIP1P1-201ENST00000602999 279 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AL161729.4-201ENST00000604650 476 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 AC124016.2-201ENST00000610058 665 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms