Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
LIMK1P53667 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMK1P53667 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 OR5J1P-201ENST00000313544 939 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMK1P53667 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LIMK1P53667 Y_RNA.46-201ENST00000362695 102 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMK1P53667 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 RPS20P2-201ENST00000402520 389 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AL390023.1-201ENST00000428836 262 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.22□□□□□ -1.89
LIMK1P53667 AL590365.1-201ENST00000450788 243 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AC112204.1-201ENST00000502591 103 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.22□□□□□ -1.89
LIMK1P53667 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.22□□□□□ -1.89
LIMK1P53667 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.22□□□□□ -1.89
LIMK1P53667 MTND2P38-201ENST00000522536 667 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 ELOCP29-201ENST00000588193 334 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AC121334.2-201ENST00000605387 271 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.22□□□□□ -1.89
LIMK1P53667 AC012360.2-201ENST00000609349 391 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.22□□□□□ -1.89
LIMK1P53667 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.22□□□□□ -1.89
LIMK1P53667 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIMK1P53667 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.21□□□□□ -1.89
LIMK1P53667 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.21□□□□□ -1.89
LIMK1P53667 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LIMK1P53667 MIR1261-201ENST00000408659 82 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC078974.1-201ENST00000411597 223 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC009237.8-201ENST00000445492 379 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
LIMK1P53667 EPS15P1-201ENST00000448836 336 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMK1P53667 AC108059.3-201ENST00000456388 214 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AP000797.1-201ENST00000478870 387 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.21□□□□□ -1.9
LIMK1P53667 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMK1P53667 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LIMK1P53667 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LIMK1P53667 RNU6-1256P-201ENST00000516539 103 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 RNU6-1003P-201ENST00000517099 105 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC123904.3-201ENST00000547218 814 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
LIMK1P53667 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.21□□□□□ -1.9
LIMK1P53667 AC135628.1-201ENST00000568867 534 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 MIR4435-1-201ENST00000582552 80 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC025811.1-201ENST00000604312 472 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 BNIP3P10-201ENST00000605360 577 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC092354.1-201ENST00000606057 376 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AL355472.4-201ENST00000610233 626 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 SDR42E1P2-201ENST00000614861 481 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC068880.5-201ENST00000624331 290 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 AC097655.1-201ENST00000635075 318 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LIMK1P53667 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIMK1P53667 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LIMK1P53667 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIMK1P53667 AL359693.1-201ENST00000614959 2407 ntBASIC3.21□□□□□ -1.9
LIMK1P53667 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
LIMK1P53667 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LIMK1P53667 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMK1P53667 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMK1P53667 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.2□□□□□ -1.9
LIMK1P53667 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 ZNF519P1-201ENST00000449011 1626 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LIMK1P53667 AC008669.1-201ENST00000565823 2178 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 MT-TH-201ENST00000387441 69 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC110754.1-201ENST00000399740 601 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 RN7SKP140-201ENST00000411196 284 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 RNA5SP107-201ENST00000411358 122 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms