Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
ACLYP53396 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.53□□□□□ -2
ACLYP53396 AC008850.1-201ENST00000427546 362 ntBASIC2.53□□□□□ -2
ACLYP53396 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.53□□□□□ -2
ACLYP53396 RPS15AP28-201ENST00000435088 386 ntBASIC2.53□□□□□ -2
ACLYP53396 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.53□□□□□ -2
ACLYP53396 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.53□□□□□ -2
ACLYP53396 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.53□□□□□ -2
ACLYP53396 BX322784.1-201ENST00000455793 1077 ntBASIC2.53□□□□□ -2
ACLYP53396 SNORD121B-201ENST00000458838 81 ntBASIC2.53□□□□□ -2
ACLYP53396 AC097493.1-201ENST00000463958 372 ntBASIC2.53□□□□□ -2
ACLYP53396 LARP1BP2-201ENST00000486594 519 ntBASIC2.53□□□□□ -2
ACLYP53396 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.53□□□□□ -2
ACLYP53396 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
ACLYP53396 OR5BM1P-201ENST00000512021 366 ntBASIC2.53□□□□□ -2
ACLYP53396 RNY4P37-201ENST00000516225 96 ntBASIC2.53□□□□□ -2
ACLYP53396 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.53□□□□□ -2
ACLYP53396 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.53□□□□□ -2
ACLYP53396 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ACLYP53396 AC010546.1-201ENST00000569391 485 ntBASIC2.53□□□□□ -2
ACLYP53396 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.53□□□□□ -2
ACLYP53396 BBIP1P1-201ENST00000602999 279 ntBASIC2.53□□□□□ -2
ACLYP53396 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ACLYP53396 AL603758.1-201ENST00000618654 241 ntBASIC2.53□□□□□ -2
ACLYP53396 AL158163.2-201ENST00000619110 700 ntBASIC2.53□□□□□ -2
ACLYP53396 UCA1.1-201ENST00000620952 75 ntBASIC2.53□□□□□ -2
ACLYP53396 AL138955.1-201ENST00000622881 1040 ntBASIC2.53□□□□□ -2
ACLYP53396 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.53□□□□□ -2
ACLYP53396 AC022336.2-201ENST00000568966 2538 ntBASIC2.53□□□□□ -2
ACLYP53396 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
ACLYP53396 AL356292.1-201ENST00000283110 373 ntBASIC2.52□□□□□ -2.01
ACLYP53396 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
ACLYP53396 RNU6-741P-201ENST00000383889 107 ntBASIC2.52□□□□□ -2.01
ACLYP53396 MIR627-201ENST00000384979 97 ntBASIC2.52□□□□□ -2.01
ACLYP53396 MIR221-201ENST00000385135 110 ntBASIC2.52□□□□□ -2.01
ACLYP53396 RNU6-952P-201ENST00000391164 108 ntBASIC2.52□□□□□ -2.01
ACLYP53396 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
ACLYP53396 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
ACLYP53396 AC104629.1-201ENST00000494226 508 ntBASIC2.52□□□□□ -2.01
ACLYP53396 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.52□□□□□ -2.01
ACLYP53396 TBCAP3-201ENST00000512475 312 ntBASIC2.52□□□□□ -2.01
ACLYP53396 MTND1P36-201ENST00000522384 936 ntBASIC2.52□□□□□ -2.01
ACLYP53396 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.52□□□□□ -2.01
ACLYP53396 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.52□□□□□ -2.01
ACLYP53396 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.52□□□□□ -2.01
ACLYP53396 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.52□□□□□ -2.01
ACLYP53396 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.52□□□□□ -2.01
ACLYP53396 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.52□□□□□ -2.01
ACLYP53396 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.52□□□□□ -2.01
ACLYP53396 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ACLYP53396 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.52□□□□□ -2.01
ACLYP53396 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.52□□□□□ -2.01
ACLYP53396 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
ACLYP53396 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
ACLYP53396 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.52□□□□□ -2.01
ACLYP53396 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
ACLYP53396 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.52□□□□□ -2.01
ACLYP53396 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
ACLYP53396 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
ACLYP53396 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
ACLYP53396 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.51□□□□□ -2.01
ACLYP53396 RNU6-359P-201ENST00000365466 108 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AL591416.1-201ENST00000404015 867 ntBASIC2.51□□□□□ -2.01
ACLYP53396 BX682237.1-201ENST00000415016 335 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.51□□□□□ -2.01
ACLYP53396 Z82210.1-201ENST00000440037 231 ntBASIC2.51□□□□□ -2.01
ACLYP53396 BNIP3P2-201ENST00000441221 577 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC009296.1-201ENST00000443146 155 ntBASIC2.51□□□□□ -2.01
ACLYP53396 MTCYBP3-201ENST00000445588 1137 ntBASIC2.51□□□□□ -2.01
ACLYP53396 CBWD4P-201ENST00000445695 655 ntBASIC2.51□□□□□ -2.01
ACLYP53396 RPL7P12-201ENST00000446719 750 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC133134.1-201ENST00000466800 359 ntBASIC2.51□□□□□ -2.01
ACLYP53396 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.51□□□□□ -2.01
ACLYP53396 CKS1BP2-201ENST00000497342 240 ntBASIC2.51□□□□□ -2.01
ACLYP53396 MTND4P2-201ENST00000507767 1203 ntBASIC2.51□□□□□ -2.01
ACLYP53396 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ACLYP53396 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.51□□□□□ -2.01
ACLYP53396 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
ACLYP53396 Y_RNA.676-201ENST00000516393 96 ntBASIC2.51□□□□□ -2.01
ACLYP53396 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.51□□□□□ -2.01
ACLYP53396 OR6C7P-201ENST00000547875 934 ntBASIC2.51□□□□□ -2.01
ACLYP53396 TRAV28-201ENST00000557548 323 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC105137.2-201ENST00000569073 466 ntBASIC2.51□□□□□ -2.01
ACLYP53396 MTND3P13-201ENST00000574391 343 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.51□□□□□ -2.01
ACLYP53396 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC103710.4-201ENST00000609301 899 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC009318.2-201ENST00000610917 651 ntBASIC2.51□□□□□ -2.01
ACLYP53396 AC104763.3-201ENST00000613765 618 ntBASIC2.51□□□□□ -2.01
ACLYP53396 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ACLYP53396 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
ACLYP53396 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.5□□□□□ -2.01
ACLYP53396 RNU6-1078P-201ENST00000364522 103 ntBASIC2.5□□□□□ -2.01
ACLYP53396 AL356057.2-201ENST00000403318 432 ntBASIC2.5□□□□□ -2.01
ACLYP53396 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
ACLYP53396 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
ACLYP53396 TPMTP3-201ENST00000411928 735 ntBASIC2.5□□□□□ -2.01
ACLYP53396 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.5□□□□□ -2.01
ACLYP53396 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.5□□□□□ -2.01
ACLYP53396 DDX3P2-201ENST00000446138 111 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms