Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORA67.1-201ENST00000364749 141 ntBASIC1.72□□□□□ -2.13
NUP98P52948 U3.29-201ENST00000391296 212 ntBASIC1.72□□□□□ -2.13
NUP98P52948 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AL136133.1-201ENST00000413694 376 ntBASIC1.72□□□□□ -2.13
NUP98P52948 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.72□□□□□ -2.13
NUP98P52948 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.72□□□□□ -2.13
NUP98P52948 SNRPGP9-201ENST00000456025 225 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AC015724.1-201ENST00000478577 156 ntBASIC1.72□□□□□ -2.13
NUP98P52948 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.72□□□□□ -2.13
NUP98P52948 AC104108.1-201ENST00000509930 412 ntBASIC1.72□□□□□ -2.13
NUP98P52948 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.72□□□□□ -2.13
NUP98P52948 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.72□□□□□ -2.13
NUP98P52948 AC004217.3-201ENST00000551552 878 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.72□□□□□ -2.13
NUP98P52948 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.72□□□□□ -2.13
NUP98P52948 MIR3921-201ENST00000577308 85 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AP003400.6-201ENST00000624698 740 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AC116618.1-201ENST00000634617 774 ntBASIC1.72□□□□□ -2.13
NUP98P52948 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.72□□□□□ -2.13
NUP98P52948 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
NUP98P52948 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
NUP98P52948 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NUP98P52948 RNU6-1339P-201ENST00000363574 91 ntBASIC1.71□□□□□ -2.14
NUP98P52948 RNU6-77P-201ENST00000410554 91 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.71□□□□□ -2.14
NUP98P52948 AL512504.1-201ENST00000415494 778 ntBASIC1.71□□□□□ -2.14
NUP98P52948 ARL2BPP3-201ENST00000421226 480 ntBASIC1.71□□□□□ -2.14
NUP98P52948 RPL27AP8-201ENST00000424277 446 ntBASIC1.71□□□□□ -2.14
NUP98P52948 RPP40P1-201ENST00000426762 456 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AL365400.1-201ENST00000431854 640 ntBASIC1.71□□□□□ -2.14
NUP98P52948 NDUFA5P4-201ENST00000436704 385 ntBASIC1.71□□□□□ -2.14
NUP98P52948 RPL23AP16-201ENST00000441715 421 ntBASIC1.71□□□□□ -2.14
NUP98P52948 COX6CP12-201ENST00000446748 202 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AC009474.2-201ENST00000451383 136 ntBASIC1.71□□□□□ -2.14
NUP98P52948 COX6CP14-201ENST00000469580 174 ntBASIC1.71□□□□□ -2.14
NUP98P52948 RPL31P60-201ENST00000478450 367 ntBASIC1.71□□□□□ -2.14
NUP98P52948 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.71□□□□□ -2.14
NUP98P52948 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NUP98P52948 AC096571.1-202ENST00000506634 735 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AL359273.1-201ENST00000510918 627 ntBASIC1.71□□□□□ -2.14
NUP98P52948 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.71□□□□□ -2.14
NUP98P52948 AC007115.1-201ENST00000546853 234 ntBASIC1.71□□□□□ -2.14
NUP98P52948 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NUP98P52948 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.71□□□□□ -2.14
NUP98P52948 AC023813.2-201ENST00000564321 469 ntBASIC1.71□□□□□ -2.14
NUP98P52948 MIR3117-201ENST00000584034 78 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.71□□□□□ -2.14
NUP98P52948 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
NUP98P52948 MTND5P35-201ENST00000557537 1720 ntBASIC1.71□□□□□ -2.14
NUP98P52948 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.71□□□□□ -2.14
NUP98P52948 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NUP98P52948 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 Y_RNA.327-201ENST00000365201 102 ntBASIC1.7□□□□□ -2.14
NUP98P52948 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
NUP98P52948 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP98P52948 AL035410.1-201ENST00000427409 427 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP98P52948 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 AL512661.1-201ENST00000434586 1253 ntBASIC1.7□□□□□ -2.14
NUP98P52948 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP98P52948 BX248409.1-201ENST00000455497 255 ntBASIC1.7□□□□□ -2.14
NUP98P52948 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
NUP98P52948 MRPL42P6-201ENST00000486397 371 ntBASIC1.7□□□□□ -2.14
NUP98P52948 RPS15AP34-201ENST00000487776 387 ntBASIC1.7□□□□□ -2.14
NUP98P52948 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.7□□□□□ -2.14
NUP98P52948 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP98P52948 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP98P52948 AC022387.2-201ENST00000604050 448 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NUP98P52948 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 SNORA68.1-201ENST00000364537 132 ntBASIC1.7□□□□□ -2.14
NUP98P52948 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.7□□□□□ -2.14
NUP98P52948 HMGN2P18-201ENST00000450680 270 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP98P52948 RNU6-1095P-201ENST00000516148 108 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AC104997.1-201ENST00000519761 717 ntBASIC1.7□□□□□ -2.14
NUP98P52948 HIGD1AP6-201ENST00000521833 279 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP98P52948 AP003033.1-201ENST00000527244 415 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AC090616.3-201ENST00000582184 217 ntBASIC1.7□□□□□ -2.14
NUP98P52948 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP98P52948 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP98P52948 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP98P52948 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NUP98P52948 TPTE2P4-201ENST00000258589 1605 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AC027514.1-201ENST00000588561 1603 ntBASIC1.69□□□□□ -2.14
NUP98P52948 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
NUP98P52948 CR848007.1-201ENST00000442354 1699 ntBASIC1.69□□□□□ -2.14
NUP98P52948 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NUP98P52948 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
NUP98P52948 RNU6-444P-201ENST00000383988 108 ntBASIC1.69□□□□□ -2.14
NUP98P52948 MIR7-2-201ENST00000384970 110 ntBASIC1.69□□□□□ -2.14
NUP98P52948 TAF9BP2-201ENST00000400856 499 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms