Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MTND2P7-201ENST00000521337 640 ntBASIC2.74□□□□□ -1.97
MSH6P52701 LRRC6P1-201ENST00000532188 885 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AP000889.2-201ENST00000532684 490 ntBASIC2.74□□□□□ -1.97
MSH6P52701 SNRPGP16-201ENST00000533275 226 ntBASIC2.74□□□□□ -1.97
MSH6P52701 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MSH6P52701 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH6P52701 AC069545.1-201ENST00000605671 358 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC018645.2-201ENST00000609151 472 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC023158.2-201ENST00000614876 543 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC068831.7-201ENST00000616954 363 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.74□□□□□ -1.97
MSH6P52701 AL138960.2-201ENST00000625145 535 ntBASIC2.74□□□□□ -1.97
MSH6P52701 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MSH6P52701 SGO1P2-201ENST00000429458 1589 ntBASIC2.74□□□□□ -1.97
MSH6P52701 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
MSH6P52701 Y_RNA.224-201ENST00000364308 111 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AL021407.1-201ENST00000404531 386 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC109780.2-201ENST00000413467 845 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AL161449.1-201ENST00000414531 1199 ntBASIC2.74□□□□□ -1.97
MSH6P52701 UBE2D3P2-201ENST00000424409 445 ntBASIC2.74□□□□□ -1.97
MSH6P52701 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH6P52701 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH6P52701 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.74□□□□□ -1.97
MSH6P52701 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH6P52701 AC068781.1-201ENST00000488231 618 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH6P52701 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH6P52701 SNORA19.3-201ENST00000516165 130 ntBASIC2.74□□□□□ -1.97
MSH6P52701 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.74□□□□□ -1.97
MSH6P52701 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MSH6P52701 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.74□□□□□ -1.97
MSH6P52701 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MSH6P52701 HSPE1P3-201ENST00000559254 309 ntBASIC2.74□□□□□ -1.97
MSH6P52701 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH6P52701 AC024257.5-201ENST00000612739 531 ntBASIC2.74□□□□□ -1.97
MSH6P52701 SNHG22-203ENST00000617833 660 ntBASIC2.74□□□□□ -1.97
MSH6P52701 AC120349.2-201ENST00000625002 298 ntBASIC2.74□□□□□ -1.97
MSH6P52701 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
MSH6P52701 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
MSH6P52701 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
MSH6P52701 AC107982.1-201ENST00000507171 1300 ntBASIC2.73□□□□□ -1.97
MSH6P52701 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH6P52701 AC027514.1-201ENST00000588561 1603 ntBASIC2.73□□□□□ -1.97
MSH6P52701 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.73□□□□□ -1.97
MSH6P52701 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MSH6P52701 AL591034.1-201ENST00000407447 340 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AL590084.1-201ENST00000407885 387 ntBASIC2.73□□□□□ -1.97
MSH6P52701 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.73□□□□□ -1.97
MSH6P52701 RNU2-42P-201ENST00000410697 113 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.73□□□□□ -1.97
MSH6P52701 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH6P52701 RPL39P6-201ENST00000448289 150 ntBASIC2.73□□□□□ -1.97
MSH6P52701 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH6P52701 RFC5P1-201ENST00000454419 874 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AC092798.1-201ENST00000458542 409 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AC073901.1-201ENST00000462471 408 ntBASIC2.73□□□□□ -1.97
MSH6P52701 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.73□□□□□ -1.97
MSH6P52701 SETP7-201ENST00000552169 453 ntBASIC2.73□□□□□ -1.97
MSH6P52701 DNAJC19P9-201ENST00000555084 351 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH6P52701 FAM60BP-201ENST00000578364 658 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AL138478.1-201ENST00000612252 832 ntBASIC2.73□□□□□ -1.97
MSH6P52701 AL049777.1-201ENST00000622740 518 ntBASIC2.73□□□□□ -1.97
MSH6P52701 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
MSH6P52701 SNORA51.11-201ENST00000384442 131 ntBASIC2.72□□□□□ -1.97
MSH6P52701 SNORA40.2-201ENST00000390847 128 ntBASIC2.72□□□□□ -1.97
MSH6P52701 SNRPEP2-201ENST00000397592 279 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH6P52701 SUMO2P2-201ENST00000456482 255 ntBASIC2.72□□□□□ -1.97
MSH6P52701 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
MSH6P52701 AC069528.1-202ENST00000482888 637 ntBASIC2.72□□□□□ -1.97
MSH6P52701 COX7A2P2-201ENST00000505291 250 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH6P52701 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH6P52701 HSPA8P13-201ENST00000523715 472 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH6P52701 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH6P52701 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH6P52701 ISCA1P3-201ENST00000577104 373 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AP001330.4-201ENST00000604350 154 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AC069304.2-201ENST00000605154 435 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AL158163.2-201ENST00000619110 700 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH6P52701 AC084768.2-201ENST00000622736 221 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AC004009.2-201ENST00000623016 728 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AL356585.4-201ENST00000623078 1229 ntBASIC2.72□□□□□ -1.97
MSH6P52701 AC095031.1-201ENST00000623685 672 ntBASIC2.72□□□□□ -1.97
MSH6P52701 ZNF720P1-201ENST00000562403 1939 ntBASIC2.71□□□□□ -1.97
MSH6P52701 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
MSH6P52701 AL136372.1-201ENST00000403060 228 ntBASIC2.71□□□□□ -1.98
MSH6P52701 RPS15AP38-201ENST00000413110 372 ntBASIC2.71□□□□□ -1.98
MSH6P52701 RPL21P32-201ENST00000419877 477 ntBASIC2.71□□□□□ -1.98
MSH6P52701 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH6P52701 AC233728.2-201ENST00000425348 757 ntBASIC2.71□□□□□ -1.98
MSH6P52701 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH6P52701 SDR42E1P3-201ENST00000438345 502 ntBASIC2.71□□□□□ -1.98
MSH6P52701 AC092427.1-201ENST00000439177 601 ntBASIC2.71□□□□□ -1.98
MSH6P52701 DNAJC19P4-201ENST00000440115 345 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms