Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCN3P51790 RNU6-1042P-201ENST00000384204 107 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 RPS3AP3-201ENST00000411933 242 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 EIF1P1-201ENST00000421436 341 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCN3P51790 AC009961.2-201ENST00000435771 251 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 TIMM9P1-201ENST00000436122 256 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 HMGB3P11-201ENST00000440127 604 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 RPL26P6-201ENST00000440913 438 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 RBMX2P4-201ENST00000441256 376 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 MTND1P1-201ENST00000445453 368 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCN3P51790 MTND1P12-201ENST00000455231 147 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 RPL9P32-201ENST00000464118 620 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC108860.1-201ENST00000484521 383 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCN3P51790 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCN3P51790 AC008885.1-201ENST00000514930 301 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCN3P51790 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC100870.1-201ENST00000522035 505 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 ERHP1-201ENST00000523006 310 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 DEFB108A-201ENST00000530110 222 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLCN3P51790 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCN3P51790 AL157394.1-201ENST00000562983 1224 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 MIR3913-1-201ENST00000577744 102 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 MIR3682-201ENST00000581338 84 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCN3P51790 AL451007.1-201ENST00000595491 289 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AL022154.1-201ENST00000604698 785 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AC004067.1-201ENST00000608733 700 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AP001506.1-201ENST00000615444 211 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 uc_338.12-201ENST00000616344 181 ntBASIC3.49□□□□□ -1.85
CLCN3P51790 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCN3P51790 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCN3P51790 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCN3P51790 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CLCN3P51790 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLCN3P51790 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 SNORA54-201ENST00000384281 123 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 MIR184-201ENST00000384962 84 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLCN3P51790 AL138885.1-201ENST00000405921 675 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 MIR1290-201ENST00000408735 78 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 RNU2-8P-201ENST00000410727 190 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 RNU2-62P-201ENST00000410868 191 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC009237.5-201ENST00000414271 501 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC093156.1-201ENST00000440382 670 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 Z99127.3-201ENST00000448158 395 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 ELOCP23-201ENST00000452014 332 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCN3P51790 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 MTCO2P4-201ENST00000517968 247 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.48□□□□□ -1.85
CLCN3P51790 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC105224.1-201ENST00000587055 421 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AP001029.3-201ENST00000588063 596 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AL161729.4-201ENST00000604650 476 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCN3P51790 AC103710.1-201ENST00000610003 901 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 RMST_8.1-201ENST00000610287 165 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AC245517.5-201ENST00000611529 162 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AC091304.9-201ENST00000612091 226 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 TUG1_2.1-201ENST00000614234 87 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 U4.5-201ENST00000617137 123 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 AC136475.10-201ENST00000620253 385 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLCN3P51790 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 PWAR6-201ENST00000552334 4618 ntBASIC3.48□□□□□ -1.85
CLCN3P51790 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCN3P51790 ZNF807-201ENST00000328088 1707 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCN3P51790 OR1S2-201ENST00000302592 978 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 DEFB109C-201ENST00000382575 264 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 DEFB109B-201ENST00000382656 264 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RNU6-278P-201ENST00000390945 109 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 UBA52P6-201ENST00000399822 382 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AL078595.1-201ENST00000404458 226 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RN7SKP285-201ENST00000410137 318 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RNU6-55P-201ENST00000411092 107 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms