Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MTND4P35-201ENST00000604257 1375 ntBASIC4.55□□□□□ -1.68
MRE11P49959 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
MRE11P49959 OR1S2-201ENST00000302592 978 ntBASIC4.55□□□□□ -1.68
MRE11P49959 RNY3P13-201ENST00000365542 102 ntBASIC4.55□□□□□ -1.68
MRE11P49959 Y_RNA.367-201ENST00000365544 101 ntBASIC4.55□□□□□ -1.68
MRE11P49959 Y_RNA.431-201ENST00000384086 102 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AC096664.2-201ENST00000411843 406 ntBASIC4.55□□□□□ -1.68
MRE11P49959 MTND3P8-201ENST00000412909 339 ntBASIC4.55□□□□□ -1.68
MRE11P49959 BTF3L4P3-201ENST00000418879 476 ntBASIC4.55□□□□□ -1.68
MRE11P49959 MTCO2P12-201ENST00000427426 682 ntBASIC4.55□□□□□ -1.68
MRE11P49959 RPS20P5-201ENST00000434808 360 ntBASIC4.55□□□□□ -1.68
MRE11P49959 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.55□□□□□ -1.68
MRE11P49959 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.55□□□□□ -1.68
MRE11P49959 IFNA20P-201ENST00000436840 528 ntBASIC4.55□□□□□ -1.68
MRE11P49959 UBE2V1P13-201ENST00000436983 439 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.55□□□□□ -1.68
MRE11P49959 HMGN2P26-201ENST00000463169 339 ntBASIC4.55□□□□□ -1.68
MRE11P49959 GMFBP1-201ENST00000467831 427 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MRE11P49959 RNU6-1314P-201ENST00000517139 104 ntBASIC4.55□□□□□ -1.68
MRE11P49959 OR5BN1P-201ENST00000532955 829 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AC092470.1-201ENST00000546187 132 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.55□□□□□ -1.68
MRE11P49959 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.55□□□□□ -1.68
MRE11P49959 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.55□□□□□ -1.68
MRE11P49959 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.55□□□□□ -1.68
MRE11P49959 MIR4738-201ENST00000579134 87 ntBASIC4.55□□□□□ -1.68
MRE11P49959 MIR4425-201ENST00000580572 84 ntBASIC4.55□□□□□ -1.68
MRE11P49959 AC010591.1-201ENST00000603941 649 ntBASIC4.55□□□□□ -1.68
MRE11P49959 C2orf27A-204ENST00000623058 969 ntBASIC4.55□□□□□ -1.68
MRE11P49959 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.55□□□□□ -1.68
MRE11P49959 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MRE11P49959 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
MRE11P49959 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MRE11P49959 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 RNU5A-8P-201ENST00000364102 114 ntBASIC4.54□□□□□ -1.68
MRE11P49959 RNU4-48P-201ENST00000365559 182 ntBASIC4.54□□□□□ -1.68
MRE11P49959 RNU6-39P-201ENST00000384344 107 ntBASIC4.54□□□□□ -1.68
MRE11P49959 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MRE11P49959 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MRE11P49959 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.54□□□□□ -1.68
MRE11P49959 MTCYBP8-201ENST00000422855 651 ntBASIC4.54□□□□□ -1.68
MRE11P49959 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 AC091286.1-201ENST00000431233 461 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.54□□□□□ -1.68
MRE11P49959 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.54□□□□□ -1.68
MRE11P49959 AC006512.1-201ENST00000468816 291 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AP000926.1-201ENST00000479573 241 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AC020893.1-201ENST00000502452 580 ntBASIC4.54□□□□□ -1.68
MRE11P49959 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
MRE11P49959 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.54□□□□□ -1.68
MRE11P49959 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.54□□□□□ -1.68
MRE11P49959 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.54□□□□□ -1.68
MRE11P49959 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.54□□□□□ -1.68
MRE11P49959 SCOCP1-201ENST00000554676 349 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.54□□□□□ -1.68
MRE11P49959 RN7SL600P-201ENST00000581811 299 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AL451044.1-201ENST00000604867 238 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AC021646.1-201ENST00000605469 484 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AC093913.1-201ENST00000614178 329 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AC015967.1-201ENST00000619893 476 ntBASIC4.54□□□□□ -1.68
MRE11P49959 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.54□□□□□ -1.68
MRE11P49959 AL445363.3-201ENST00000623080 671 ntBASIC4.54□□□□□ -1.68
MRE11P49959 AL359757.2-201ENST00000624309 274 ntBASIC4.54□□□□□ -1.68
MRE11P49959 MIR4496-201ENST00000635896 61 ntBASIC4.54□□□□□ -1.68
MRE11P49959 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.54□□□□□ -1.68
MRE11P49959 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRE11P49959 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
MRE11P49959 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.53□□□□□ -1.68
MRE11P49959 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRE11P49959 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
MRE11P49959 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRE11P49959 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRE11P49959 MIR331-201ENST00000362302 94 ntBASIC4.53□□□□□ -1.68
MRE11P49959 Y_RNA.22-201ENST00000362492 102 ntBASIC4.53□□□□□ -1.68
MRE11P49959 RNU5E-8P-201ENST00000363502 116 ntBASIC4.53□□□□□ -1.68
MRE11P49959 Y_RNA.184-201ENST00000363884 108 ntBASIC4.53□□□□□ -1.68
MRE11P49959 MIR19A-201ENST00000384878 82 ntBASIC4.53□□□□□ -1.68
MRE11P49959 MIR153-1-201ENST00000384914 90 ntBASIC4.53□□□□□ -1.68
MRE11P49959 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 TXNP7-201ENST00000406296 293 ntBASIC4.53□□□□□ -1.68
MRE11P49959 NCOR1P3-201ENST00000420479 303 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AL645937.1-202ENST00000421799 937 ntBASIC4.53□□□□□ -1.68
MRE11P49959 DUTP6-201ENST00000425573 462 ntBASIC4.53□□□□□ -1.68
MRE11P49959 OR4F13P-201ENST00000428478 931 ntBASIC4.53□□□□□ -1.68
MRE11P49959 OR4K11P-201ENST00000431829 904 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 AL356276.2-201ENST00000435919 558 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
MRE11P49959 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms