Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 USP9YP24-201ENST00000434374 697 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.28□□□□□ -2.04
CX3CR1P49238 RPL35AP22-201ENST00000436855 335 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC105272.1-201ENST00000438604 198 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CR1P49238 USP9YP17-201ENST00000444617 696 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC090096.1-201ENST00000489168 390 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RPS15AP36-201ENST00000492022 382 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 HSPE1P23-201ENST00000509838 286 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC008716.1-201ENST00000511084 513 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CR1P49238 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.28□□□□□ -2.04
CX3CR1P49238 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CR1P49238 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CX3CR1P49238 AC123904.3-201ENST00000547218 814 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 BNIP3P40-201ENST00000596017 556 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.28□□□□□ -2.04
CX3CR1P49238 AL357094.1-201ENST00000603845 844 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.28□□□□□ -2.04
CX3CR1P49238 AC109809.1-201ENST00000619665 545 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AL391262.2-201ENST00000622466 494 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AP001002.2-201ENST00000625137 386 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CX3CR1P49238 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CR1P49238 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.28□□□□□ -2.05
CX3CR1P49238 PABPC1P9-201ENST00000426076 1612 ntBASIC2.28□□□□□ -2.05
CX3CR1P49238 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
CX3CR1P49238 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CX3CR1P49238 RNU6-83P-201ENST00000384568 112 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 MIR491-201ENST00000384877 84 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 MIR888-201ENST00000401186 77 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CX3CR1P49238 MTCYBP38-201ENST00000417160 1123 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 USP9YP20-201ENST00000419224 558 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.27□□□□□ -2.05
CX3CR1P49238 Z80107.1-201ENST00000436830 412 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 SNRPEP7-201ENST00000438350 220 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL117351.1-201ENST00000438864 766 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 RPS12P2-201ENST00000439728 269 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC011816.1-201ENST00000441346 546 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CR1P49238 DUXAP8-207ENST00000456786 622 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CX3CR1P49238 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.27□□□□□ -2.05
CX3CR1P49238 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 SNORA31.18-201ENST00000517043 134 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.27□□□□□ -2.05
CX3CR1P49238 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AGGF1P5-201ENST00000567900 919 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CR1P49238 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 VN1R92P-201ENST00000598511 928 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL450336.1-201ENST00000605180 586 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC007619.2-201ENST00000605743 379 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC090186.1-201ENST00000605991 572 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC027449.1-201ENST00000608890 407 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AC013562.2-201ENST00000611632 603 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL139418.1-201ENST00000613613 177 ntBASIC2.27□□□□□ -2.05
CX3CR1P49238 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CR1P49238 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CR1P49238 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CR1P49238 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CX3CR1P49238 DDX43P2-201ENST00000604753 1354 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 RNU6-223P-201ENST00000362830 107 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 RNA5SP387-201ENST00000364226 106 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 MIR513B-201ENST00000385136 84 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CX3CR1P49238 RNU6-584P-201ENST00000410350 95 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 USP9YP33-201ENST00000412220 421 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 RPLP0P7-201ENST00000416050 667 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 USP9YP13-201ENST00000417797 480 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 USP9YP35-201ENST00000435696 412 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC104389.3-201ENST00000445629 235 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AL160314.1-201ENST00000490836 438 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 RPS27P27-201ENST00000498779 255 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms