Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RN7SL601P-201ENST00000471221 293 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AL049830.2-201ENST00000480072 201 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AC092989.1-201ENST00000481235 277 ntBASIC3.77□□□□□ -1.81
CIITAP33076 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CIITAP33076 AC069439.1-201ENST00000494739 167 ntBASIC3.77□□□□□ -1.81
CIITAP33076 MLLT10P2-201ENST00000506434 249 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.77□□□□□ -1.81
CIITAP33076 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.77□□□□□ -1.81
CIITAP33076 RNU6-1095P-201ENST00000516148 108 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AC022616.3-201ENST00000523940 148 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.77□□□□□ -1.81
CIITAP33076 AC126177.3-201ENST00000551839 688 ntBASIC3.77□□□□□ -1.81
CIITAP33076 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.77□□□□□ -1.81
CIITAP33076 RPL21P12-201ENST00000559810 515 ntBASIC3.77□□□□□ -1.81
CIITAP33076 MIR5047-201ENST00000579212 100 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AP001029.3-201ENST00000588063 596 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.77□□□□□ -1.81
CIITAP33076 AC007179.3-201ENST00000604976 235 ntBASIC3.77□□□□□ -1.81
CIITAP33076 AL159972.1-201ENST00000625150 448 ntBASIC3.77□□□□□ -1.81
CIITAP33076 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CIITAP33076 AL138713.1-201ENST00000624026 2130 ntBASIC3.77□□□□□ -1.81
CIITAP33076 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CIITAP33076 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CIITAP33076 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CIITAP33076 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
CIITAP33076 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CIITAP33076 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
CIITAP33076 RNU6-173P-201ENST00000364215 104 ntBASIC3.76□□□□□ -1.81
CIITAP33076 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CIITAP33076 RNU6-1074P-201ENST00000383995 104 ntBASIC3.76□□□□□ -1.81
CIITAP33076 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CIITAP33076 MIR1277-201ENST00000408536 78 ntBASIC3.76□□□□□ -1.81
CIITAP33076 RNU2-8P-201ENST00000410727 190 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.76□□□□□ -1.81
CIITAP33076 AC007390.1-201ENST00000415722 356 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC233728.2-201ENST00000425348 757 ntBASIC3.76□□□□□ -1.81
CIITAP33076 ARF4P2-201ENST00000430209 526 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC002486.1-201ENST00000435098 391 ntBASIC3.76□□□□□ -1.81
CIITAP33076 TIMM9P1-201ENST00000436122 256 ntBASIC3.76□□□□□ -1.81
CIITAP33076 RPS15AP9-201ENST00000439856 381 ntBASIC3.76□□□□□ -1.81
CIITAP33076 MTATP6P30-201ENST00000443540 664 ntBASIC3.76□□□□□ -1.81
CIITAP33076 RAC1P7-201ENST00000445367 377 ntBASIC3.76□□□□□ -1.81
CIITAP33076 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.76□□□□□ -1.81
CIITAP33076 MTND2P24-201ENST00000453434 806 ntBASIC3.76□□□□□ -1.81
CIITAP33076 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
CIITAP33076 RPL23AP41-201ENST00000484754 458 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC007182.2-201ENST00000489251 402 ntBASIC3.76□□□□□ -1.81
CIITAP33076 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.76□□□□□ -1.81
CIITAP33076 RNA5SP337-201ENST00000517007 109 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC090572.1-201ENST00000519251 160 ntBASIC3.76□□□□□ -1.81
CIITAP33076 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CIITAP33076 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.76□□□□□ -1.81
CIITAP33076 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.76□□□□□ -1.81
CIITAP33076 OR4T1P-201ENST00000554933 911 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.76□□□□□ -1.81
CIITAP33076 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.76□□□□□ -1.81
CIITAP33076 AP000907.4-201ENST00000604143 237 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC012468.1-201ENST00000604888 430 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AL136363.1-201ENST00000605349 337 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC073657.2-201ENST00000605661 303 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AL161734.1-201ENST00000609720 557 ntBASIC3.76□□□□□ -1.81
CIITAP33076 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CIITAP33076 SNORD39.4-201ENST00000620099 78 ntBASIC3.76□□□□□ -1.81
CIITAP33076 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.76□□□□□ -1.81
CIITAP33076 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CIITAP33076 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CIITAP33076 AP001148.1-201ENST00000624124 2359 ntBASIC3.76□□□□□ -1.81
CIITAP33076 AC010733.2-201ENST00000589496 5702 ntBASIC3.76□□□□□ -1.81
CIITAP33076 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.76□□□□□ -1.81
CIITAP33076 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CIITAP33076 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.75□□□□□ -1.81
CIITAP33076 RNU1-70P-201ENST00000362618 164 ntBASIC3.75□□□□□ -1.81
CIITAP33076 SNORA70.4-201ENST00000365509 134 ntBASIC3.75□□□□□ -1.81
CIITAP33076 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CIITAP33076 AL356968.1-201ENST00000416622 474 ntBASIC3.75□□□□□ -1.81
CIITAP33076 FCF1P1-201ENST00000432690 571 ntBASIC3.75□□□□□ -1.81
CIITAP33076 UBE2V1P13-201ENST00000436983 439 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AL662791.1-201ENST00000441992 928 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 Z75741.1-201ENST00000446793 314 ntBASIC3.75□□□□□ -1.81
CIITAP33076 MRPS31P2-201ENST00000451581 518 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.75□□□□□ -1.81
CIITAP33076 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
CIITAP33076 RPL32P34-201ENST00000486380 400 ntBASIC3.75□□□□□ -1.81
CIITAP33076 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.75□□□□□ -1.81
CIITAP33076 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 APOOP4-201ENST00000513530 597 ntBASIC3.75□□□□□ -1.81
CIITAP33076 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 Y_RNA.704-201ENST00000516851 102 ntBASIC3.75□□□□□ -1.81
CIITAP33076 RNU6-528P-201ENST00000516926 100 ntBASIC3.75□□□□□ -1.81
CIITAP33076 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
CIITAP33076 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.75□□□□□ -1.81
CIITAP33076 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.75□□□□□ -1.81
CIITAP33076 AP003072.2-201ENST00000527756 676 ntBASIC3.75□□□□□ -1.81
CIITAP33076 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms