Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.46□□□□□ -1.7
CNGA1P29973 HMGB1P12-201ENST00000438594 598 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.46□□□□□ -1.7
CNGA1P29973 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.46□□□□□ -1.7
CNGA1P29973 HMGN2P16-201ENST00000456802 261 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 RPS29P15-201ENST00000458329 171 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 GMFBP1-201ENST00000467831 427 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 RPS4XP13-201ENST00000483219 789 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.46□□□□□ -1.7
CNGA1P29973 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.46□□□□□ -1.7
CNGA1P29973 FTH1P9-201ENST00000513251 355 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 MIR2114-201ENST00000516645 80 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 RN7SKP60-201ENST00000516985 239 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.46□□□□□ -1.7
CNGA1P29973 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.46□□□□□ -1.7
CNGA1P29973 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
CNGA1P29973 CBX3P5-201ENST00000552017 521 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AL133241.1-201ENST00000556832 487 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AP005205.1-201ENST00000563503 508 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 AC104763.2-201ENST00000604179 382 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 FER-210ENST00000628534 558 ntTSL 5 BASIC4.46□□□□□ -1.7
CNGA1P29973 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.46□□□□□ -1.7
CNGA1P29973 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNGA1P29973 AC008568.2-201ENST00000623862 2313 ntBASIC4.46□□□□□ -1.7
CNGA1P29973 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CNGA1P29973 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNGA1P29973 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.45□□□□□ -1.7
CNGA1P29973 AC004972.1-201ENST00000623934 2209 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 API5P2-201ENST00000397055 1498 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 CKAP2P1-201ENST00000555477 2049 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 RNU6-996P-201ENST00000365438 107 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 Y_RNA.573-201ENST00000384763 105 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AL139397.2-201ENST00000404529 772 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 RNU6-387P-201ENST00000411331 105 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 Z85995.1-201ENST00000415547 335 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.45□□□□□ -1.7
CNGA1P29973 RPL31P60-201ENST00000478450 367 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 MTND1P35-201ENST00000526739 508 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.45□□□□□ -1.7
CNGA1P29973 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.45□□□□□ -1.7
CNGA1P29973 BNIP3P30-201ENST00000601184 574 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AL354950.2-201ENST00000617939 290 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AC011155.2-201ENST00000623202 216 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AC048347.1-201ENST00000624621 427 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.45□□□□□ -1.7
CNGA1P29973 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.45□□□□□ -1.7
CNGA1P29973 FAM35DP-201ENST00000323387 2712 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 AL672296.1-201ENST00000427780 2158 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
CNGA1P29973 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
CNGA1P29973 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNGA1P29973 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CNGA1P29973 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNGA1P29973 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNGA1P29973 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNGA1P29973 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 AL139276.1-201ENST00000311910 1001 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 RNA5SP399-201ENST00000364003 117 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 Y_RNA.255-201ENST00000364581 97 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 SNORD115-7-201ENST00000365306 82 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 RNU6-1029P-201ENST00000384109 107 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 MIR183-201ENST00000384958 110 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AL109913.1-201ENST00000421173 514 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AL591419.1-201ENST00000427423 339 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 SEPT14P3-201ENST00000439401 183 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 AL732372.2-207ENST00000445840 183 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC073415.1-201ENST00000449240 153 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 SEPT14P2-201ENST00000453405 183 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.44□□□□□ -1.7
CNGA1P29973 RPL21P11-201ENST00000461458 483 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC087588.1-201ENST00000462203 316 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 RPS20P22-201ENST00000473700 357 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC078785.3-201ENST00000476607 425 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 RN7SL293P-201ENST00000481765 281 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.44□□□□□ -1.7
CNGA1P29973 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.44□□□□□ -1.7
CNGA1P29973 UBE2CP3-201ENST00000502715 450 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 PCBP2P3-201ENST00000509726 843 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC098591.2-201ENST00000510152 315 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 SEPT14P4-201ENST00000513445 186 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 RNA5SP503-201ENST00000517047 117 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 FO082796.1-201ENST00000523795 183 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 AP005435.4-201ENST00000529514 284 ntBASIC4.44□□□□□ -1.7
CNGA1P29973 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.44□□□□□ -1.7
CNGA1P29973 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms