Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC009901.1-201ENST00000506703 541 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AF131216.2-201ENST00000512316 564 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 AC022634.1-201ENST00000520765 532 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A5P29400 AC055876.5-201ENST00000605667 259 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC090617.7-201ENST00000623952 126 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 AC097372.4-201ENST00000625025 466 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 MTND2P41-201ENST00000637599 773 ntBASIC1.71□□□□□ -2.14
COL4A5P29400 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
COL4A5P29400 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.7□□□□□ -2.14
COL4A5P29400 U8.1-201ENST00000362843 134 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 RNU4-41P-201ENST00000364426 143 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 RNU6-1180P-201ENST00000364935 107 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 RNU6-1074P-201ENST00000383995 104 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AL136372.1-201ENST00000403060 228 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL4A5P29400 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 MTND4LP10-201ENST00000435146 291 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AC090774.1-201ENST00000435925 246 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AC092170.1-201ENST00000440211 356 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A5P29400 RNA5SP310-201ENST00000459084 116 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 RPL21P39-201ENST00000463605 483 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 RPS26P21-201ENST00000475397 348 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A5P29400 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AC004217.3-201ENST00000551552 878 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AC010928.2-201ENST00000588017 287 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 AP002826.1-201ENST00000608835 315 ntBASIC1.7□□□□□ -2.14
COL4A5P29400 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL4A5P29400 AC025263.3-201ENST00000622965 1396 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A5P29400 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A5P29400 RNU6-712P-201ENST00000410558 100 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A5P29400 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A5P29400 AL445669.1-201ENST00000426743 755 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 AC093422.3-201ENST00000428506 305 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A5P29400 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A5P29400 AC002542.1-201ENST00000440683 193 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 OR6K5P-201ENST00000447050 945 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A5P29400 RNU6-551P-201ENST00000516661 103 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A5P29400 AL360181.4-201ENST00000621752 134 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 AC091895.1-201ENST00000624494 256 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A5P29400 AC007342.9-201ENST00000623877 1385 ntBASIC1.69□□□□□ -2.14
COL4A5P29400 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A5P29400 MAPK10-266ENST00000641066 6555 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A5P29400 RNU6-543P-201ENST00000362576 108 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 RNU6-730P-201ENST00000383954 104 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 TMSB4XP8-201ENST00000402089 135 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 RPS15AP38-201ENST00000413110 372 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 TMSB4XP6-201ENST00000415187 135 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 Z85995.1-201ENST00000415547 335 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 RPL7P30-201ENST00000420888 709 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 TMSB4XP1-201ENST00000424567 135 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.68□□□□□ -2.14
COL4A5P29400 AL645638.1-201ENST00000440519 361 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A5P29400 RPS29P1-201ENST00000465274 159 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 SETP11-201ENST00000473027 690 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 NUP58P1-201ENST00000502546 1738 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 AC093767.1-201ENST00000504523 156 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A5P29400 PRELID3BP4-201ENST00000515476 571 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 RNA5SP61-201ENST00000516453 100 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.68□□□□□ -2.14
COL4A5P29400 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A5P29400 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A5P29400 LSM6P2-201ENST00000552208 177 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 AC121758.2-201ENST00000553271 193 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.68□□□□□ -2.14
COL4A5P29400 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A5P29400 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.68□□□□□ -2.14
COL4A5P29400 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A5P29400 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A5P29400 AL133507.1-201ENST00000605269 557 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.68□□□□□ -2.14
COL4A5P29400 AC090116.1-201ENST00000615679 446 ntBASIC1.68□□□□□ -2.14
COL4A5P29400 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
COL4A5P29400 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A5P29400 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A5P29400 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
COL4A5P29400 RNU6-374P-201ENST00000364146 108 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 SNORD115-48-201ENST00000364764 76 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
COL4A5P29400 RNU6-444P-201ENST00000383988 108 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 RNA5SP354-201ENST00000391247 136 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 RPS4XP3-201ENST00000398541 413 ntBASIC1.67□□□□□ -2.14
COL4A5P29400 RNA5SP38-201ENST00000410750 119 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms