Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-1083P-201ENST00000384022 107 ntBASIC3.41□□□□□ -1.86
BDNFP23560 RNU6-817P-201ENST00000391083 104 ntBASIC3.41□□□□□ -1.86
BDNFP23560 RNU2-49P-201ENST00000410666 184 ntBASIC3.41□□□□□ -1.86
BDNFP23560 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.41□□□□□ -1.86
BDNFP23560 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC078974.1-201ENST00000411597 223 ntBASIC3.41□□□□□ -1.86
BDNFP23560 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.41□□□□□ -1.86
BDNFP23560 XKRYP1-201ENST00000423438 492 ntBASIC3.41□□□□□ -1.86
BDNFP23560 ISCA1P1-201ENST00000426679 387 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC010153.1-201ENST00000432862 727 ntBASIC3.41□□□□□ -1.86
BDNFP23560 XKRYP2-201ENST00000432915 492 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
BDNFP23560 RPL21P2-201ENST00000440049 481 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
BDNFP23560 MTCO1P42-201ENST00000457379 726 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC109925.1-201ENST00000478069 331 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
BDNFP23560 RPS27AP10-201ENST00000496103 208 ntBASIC3.41□□□□□ -1.86
BDNFP23560 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BDNFP23560 RNA5SP385-201ENST00000515947 110 ntBASIC3.41□□□□□ -1.86
BDNFP23560 SNORA31.3-201ENST00000516029 96 ntBASIC3.41□□□□□ -1.86
BDNFP23560 SNORD19.2-201ENST00000516978 73 ntBASIC3.41□□□□□ -1.86
BDNFP23560 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.41□□□□□ -1.86
BDNFP23560 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.41□□□□□ -1.86
BDNFP23560 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 AC007954.1-201ENST00000554198 494 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.41□□□□□ -1.86
BDNFP23560 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.41□□□□□ -1.86
BDNFP23560 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.41□□□□□ -1.86
BDNFP23560 OR1M4P-201ENST00000589199 287 ntBASIC3.41□□□□□ -1.86
BDNFP23560 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.41□□□□□ -1.86
BDNFP23560 AL161734.1-201ENST00000609720 557 ntBASIC3.41□□□□□ -1.86
BDNFP23560 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BDNFP23560 AC104454.1-201ENST00000421341 1401 ntBASIC3.41□□□□□ -1.86
BDNFP23560 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BDNFP23560 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.41□□□□□ -1.86
BDNFP23560 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
BDNFP23560 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BDNFP23560 U8.9-201ENST00000365667 134 ntBASIC3.4□□□□□ -1.87
BDNFP23560 SET-203ENST00000372688 801 ntTSL 2 BASIC3.4□□□□□ -1.87
BDNFP23560 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 NDUFB4P5-201ENST00000415445 361 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.4□□□□□ -1.87
BDNFP23560 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.4□□□□□ -1.87
BDNFP23560 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 RPL23AP20-201ENST00000447965 421 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
BDNFP23560 RN7SL863P-201ENST00000462370 296 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC112204.1-201ENST00000502591 103 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 RNU5F-8P-201ENST00000515941 111 ntBASIC3.4□□□□□ -1.87
BDNFP23560 RNU1-103P-201ENST00000516502 125 ntBASIC3.4□□□□□ -1.87
BDNFP23560 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.4□□□□□ -1.87
BDNFP23560 AC109329.2-201ENST00000519658 482 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.4□□□□□ -1.87
BDNFP23560 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.4□□□□□ -1.87
BDNFP23560 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.4□□□□□ -1.87
BDNFP23560 AL359999.1-201ENST00000604513 294 ntBASIC3.4□□□□□ -1.87
BDNFP23560 uc_338.12-201ENST00000616344 181 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC010149.2-201ENST00000637608 315 ntBASIC3.4□□□□□ -1.87
BDNFP23560 MIR7515-201ENST00000637837 67 ntBASIC3.4□□□□□ -1.87
BDNFP23560 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.4□□□□□ -1.87
BDNFP23560 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.4□□□□□ -1.87
BDNFP23560 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
BDNFP23560 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
BDNFP23560 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BDNFP23560 RNU6-778P-201ENST00000363269 103 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.39□□□□□ -1.87
BDNFP23560 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
BDNFP23560 RNU6-954P-201ENST00000411355 107 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.39□□□□□ -1.87
BDNFP23560 BX679664.1-201ENST00000434429 253 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.39□□□□□ -1.87
BDNFP23560 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.39□□□□□ -1.87
BDNFP23560 AL008629.1-201ENST00000438615 184 ntBASIC3.39□□□□□ -1.87
BDNFP23560 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.39□□□□□ -1.87
BDNFP23560 NEFMP1-201ENST00000443423 1006 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.39□□□□□ -1.87
BDNFP23560 OR6C5P-201ENST00000452388 923 ntBASIC3.39□□□□□ -1.87
BDNFP23560 FABP5P15-201ENST00000453566 214 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
BDNFP23560 RPS29P20-201ENST00000489592 171 ntBASIC3.39□□□□□ -1.87
BDNFP23560 MTND4LP18-201ENST00000526864 291 ntBASIC3.39□□□□□ -1.87
BDNFP23560 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.39□□□□□ -1.87
BDNFP23560 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms