Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.19□□□□□ -2.06
USF1P22415 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC114786.4-201ENST00000508771 728 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 AC024589.1-201ENST00000512207 263 ntBASIC2.19□□□□□ -2.06
USF1P22415 MRPS36P2-201ENST00000512569 299 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC114797.1-201ENST00000514003 728 ntBASIC2.19□□□□□ -2.06
USF1P22415 RNA5SP282-201ENST00000516355 108 ntBASIC2.19□□□□□ -2.06
USF1P22415 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.19□□□□□ -2.06
USF1P22415 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.19□□□□□ -2.06
USF1P22415 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.19□□□□□ -2.06
USF1P22415 ATP5F1P5-201ENST00000526403 760 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.19□□□□□ -2.06
USF1P22415 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USF1P22415 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.19□□□□□ -2.06
USF1P22415 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.19□□□□□ -2.06
USF1P22415 OR1M4P-201ENST00000589199 287 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.19□□□□□ -2.06
USF1P22415 AC018645.2-201ENST00000609151 472 ntBASIC2.19□□□□□ -2.06
USF1P22415 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.19□□□□□ -2.06
USF1P22415 AC109809.1-201ENST00000619665 545 ntBASIC2.19□□□□□ -2.06
USF1P22415 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
USF1P22415 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USF1P22415 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USF1P22415 CCT4P2-201ENST00000233836 1548 ntBASIC2.18□□□□□ -2.06
USF1P22415 PABPC1P9-201ENST00000426076 1612 ntBASIC2.18□□□□□ -2.06
USF1P22415 RNU6-223P-201ENST00000362830 107 ntBASIC2.18□□□□□ -2.06
USF1P22415 RNU5E-10P-201ENST00000363506 118 ntBASIC2.18□□□□□ -2.06
USF1P22415 XGY1-201ENST00000381172 446 ntBASIC2.18□□□□□ -2.06
USF1P22415 RNU6-140P-201ENST00000384566 108 ntBASIC2.18□□□□□ -2.06
USF1P22415 U3.20-201ENST00000390909 217 ntBASIC2.18□□□□□ -2.06
USF1P22415 AL513331.1-201ENST00000411908 397 ntBASIC2.18□□□□□ -2.06
USF1P22415 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USF1P22415 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.18□□□□□ -2.06
USF1P22415 RPLP0P7-201ENST00000416050 667 ntBASIC2.18□□□□□ -2.06
USF1P22415 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.18□□□□□ -2.06
USF1P22415 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.18□□□□□ -2.06
USF1P22415 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.18□□□□□ -2.06
USF1P22415 ZYG11AP1-201ENST00000430329 837 ntBASIC2.18□□□□□ -2.06
USF1P22415 NANOGP2-201ENST00000435391 727 ntBASIC2.18□□□□□ -2.06
USF1P22415 RPL35AP22-201ENST00000436855 335 ntBASIC2.18□□□□□ -2.06
USF1P22415 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
USF1P22415 MRPL50P4-201ENST00000446432 475 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC079395.1-201ENST00000510981 262 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC109445.1-201ENST00000512356 383 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.18□□□□□ -2.06
USF1P22415 AC025881.1-201ENST00000518851 512 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC022634.1-201ENST00000520765 532 ntBASIC2.18□□□□□ -2.06
USF1P22415 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.18□□□□□ -2.06
USF1P22415 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.18□□□□□ -2.06
USF1P22415 AL512310.1-201ENST00000548639 172 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC090616.3-201ENST00000582184 217 ntBASIC2.18□□□□□ -2.06
USF1P22415 HMGN2P15-201ENST00000585707 270 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.18□□□□□ -2.06
USF1P22415 BNIP3P27-201ENST00000599991 412 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC007621.1-201ENST00000604544 437 ntBASIC2.18□□□□□ -2.06
USF1P22415 AL139344.1-201ENST00000605228 195 ntBASIC2.18□□□□□ -2.06
USF1P22415 FTX_3.1-201ENST00000610451 147 ntBASIC2.18□□□□□ -2.06
USF1P22415 AC010133.1-201ENST00000615809 842 ntBASIC2.18□□□□□ -2.06
USF1P22415 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
USF1P22415 AL138960.2-201ENST00000625145 535 ntBASIC2.18□□□□□ -2.06
USF1P22415 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.18□□□□□ -2.06
USF1P22415 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
USF1P22415 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.17□□□□□ -2.06
USF1P22415 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
USF1P22415 U8.2-201ENST00000363156 134 ntBASIC2.17□□□□□ -2.06
USF1P22415 RNU1-100P-201ENST00000365255 165 ntBASIC2.17□□□□□ -2.06
USF1P22415 RNU6-744P-201ENST00000365557 107 ntBASIC2.17□□□□□ -2.06
USF1P22415 DEFA7P-201ENST00000382676 285 ntBASIC2.17□□□□□ -2.06
USF1P22415 RNU1-39P-201ENST00000383897 165 ntBASIC2.17□□□□□ -2.06
USF1P22415 RNU6-1316P-201ENST00000384242 108 ntBASIC2.17□□□□□ -2.06
USF1P22415 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
USF1P22415 TXNP7-201ENST00000406296 293 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.17□□□□□ -2.06
USF1P22415 AL451054.2-201ENST00000420896 202 ntBASIC2.17□□□□□ -2.06
USF1P22415 AL513175.2-201ENST00000422071 443 ntBASIC2.17□□□□□ -2.06
USF1P22415 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.17□□□□□ -2.06
USF1P22415 COX7BP2-201ENST00000437976 242 ntBASIC2.17□□□□□ -2.06
USF1P22415 MTCO1P53-201ENST00000441633 699 ntBASIC2.17□□□□□ -2.06
USF1P22415 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
USF1P22415 ST13P20-201ENST00000447996 1065 ntBASIC2.17□□□□□ -2.06
USF1P22415 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USF1P22415 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.17□□□□□ -2.06
USF1P22415 MEMO1P3-201ENST00000459811 302 ntBASIC2.17□□□□□ -2.06
USF1P22415 MRPS17P3-201ENST00000465453 385 ntBASIC2.17□□□□□ -2.06
USF1P22415 RPS15AP34-201ENST00000487776 387 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.17□□□□□ -2.06
USF1P22415 AC008716.1-201ENST00000511084 513 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.17□□□□□ -2.06
USF1P22415 RNA5SP471-201ENST00000516971 106 ntBASIC2.17□□□□□ -2.06
USF1P22415 YWHAZP1-201ENST00000556286 722 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.17□□□□□ -2.06
USF1P22415 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.17□□□□□ -2.06
USF1P22415 MIR4635-201ENST00000583759 79 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC002545.1-201ENST00000592511 181 ntBASIC2.17□□□□□ -2.06
USF1P22415 BX664608.1-201ENST00000610519 487 ntBASIC2.17□□□□□ -2.06
USF1P22415 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC245517.5-201ENST00000611529 162 ntBASIC2.17□□□□□ -2.06
USF1P22415 AC008498.1-201ENST00000613012 531 ntBASIC2.17□□□□□ -2.06
USF1P22415 TUG1_2.1-201ENST00000614234 87 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms